Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01117 ATGAAAATCACGAAGTACCATGTCATTAGCAGCAAGTGTGCTGCCATTGTGGGCAGCAAACCTCCAAGTCAGTGTGGTCGCCAGCTTCGCTTCTCGCAGACACTCCCAAACAGATCAATCCAGGACACCGCTCCTCTACAATCAGTTCTGGAGAGTTTGGTTTTCTTGGTGTTGCTGTTGAAGTGTGTTGGTGATACTGATAGCGATCATGCTGGAAACGTGATTACGTGGGATGATTTCATGGTGGATGAAAAGGATACAACATCCAACGTTGGTGGTCGAGTTATTGTGGTCGATCAAAATGGTAACGGAGATTCAACCACGGTTCAAGCAGCTGTAGATATGGTTCCGCAAAACAACACACAGAGGGTCAAGATATTCATTTATCCTGGAATTTATAGTACAAAGGCATCAGACAAAGACTCCAACGGCCAAGAAATGGGCACAATTAGTACAGCAACTGTATGGGTACAATCTGATTTTTTCTGCGCAACAGCTCTTACAATTCAGGAGTGTGTTGTATACTCTGTAGCTGAGTTTTGGGGAGCAATTGCAGCTCATCACAGAGACTCAGAAGATGAAGATACAGGCTTTTCATTTGTTAATTGCACAATCAAAGGAAGTGGTAGTGTGTTTCTTGGGAGAGCATGGGGGAACTATGCAACAACAATCTATTCAAACTGTGACATGGATGATGTTATTAATCCCTTGGGATGGAGCGATTGGGGTGATTCATCAAGACAAGGGACTGCAATGTTTGGGGAGTATGAGTGTTCAGGAAAAGGATCAAACAGAAGTGAGAGGGTGGAATGGTCAAAAGCTCTAAGCAGAGAAGAAGCTGAGCCTTTTCAGAGCAGAGACTACATATATGGAGATGGATGGCTTAGACTATAG 894 0.4396 MKITKYHVISSKCAAIVGSKPPSQCGRQLRFSQTLPNRSIQDTAPLQSVLESLVFLVLLLKCVGDTDSDHAGNVITWDDFMVDEKDTTSNVGGRVIVVDQNGNGDSTTVQAAVDMVPQNNTQRVKIFIYPGIYSTKASDKDSNGQEMGTISTATVWVQSDFFCATALTIQECVVYSVAEFWGAIAAHHRDSEDEDTGFSFVNCTIKGSGSVFLGRAWGNYATTIYSNCDMDDVINPLGWSDWGDSSRQGTAMFGEYECSGKGSNRSERVEWSKALSREEAEPFQSRDYIYGDGWLRL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01117 297 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 84 171 - -
Vian7g01117 297 Gene3D - 74 168 IPR012334 -
Vian7g01117 297 Pfam Pectinesterase 162 292 IPR000070 GO:0030599|GO:0042545
Vian7g01117 297 Gene3D - 169 297 IPR012334 -
Vian7g01117 297 SUPERFAMILY Pectin lyase-like 93 295 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01117 Vian-Chr7 19356532 19360227 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01117 94 248 Carbohydrate Esterase AT5G55590 34.127 2.62e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01117 K01051 - gmx:100812850 251.521