Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01090 ATGGACATGGCTGTTTTAATCCTTGACTTCAACGAGTTCTCATTAGCTTCCAAGATCATGGAGAATGAAAGAGAAGATGAGATTGAGGATATGTCAACGTCACCCCCGTCTCTGGGCTCCCTGCAATTTGCAGGGAGCAATGGCTTTGGTCACAGCATGGAGTTCATGTCTCAGGCATACCTTCCCAATGTGTACACTGATATTGACATAAAAATTGAGGATTCCAATTTCAACCAAGATCCCCCCCTCCCCATTTATCTCAAGTTTGAGGATGTAGAGTATAAGGTGAGAGCTAGCCAAGCGGCTTCCACTAATCCTGTGAAGTCAGTGATGTCAAAAGTTGCCATACAACACAACCTGGGAGAAGATAAATACAAGAAAATTTTGAAGGGTATGACAGGAAGCATTGGCCCTGGTGAAATTCTTGCTTTGATGGGTCCTTCTGGGAGTGGAAAGACAACCTTGTTGAGAGTTGTAGGGGGAAGATTAGTTGAAAACGTAAAGGGAAAGATAACTTACAATGACGTTCGATTTAATGCAGCTGTCAAGAGAAGGATTGGCTTTGTTACACAAGAGGATGTGCTTTTCCCACAACTTACAGTAGAGGAAACATTGATCTTCTCTGCATTCTTAAGGTTACCAGGCAATATGAGCGAGCAACAAAAATATGCAAGAGTGGAGACCACTATCAAGGAGCTAGGCCTTGAAAGATGTCGCCACACAAAAATAGGTGGAGGATATCTCAAAAGCATATCTGGAGGAGAAAGGAAGCGAACCAGCATAGGCTATGAAATCCTTGTTGACCCTTCACTGCTTCTACTTGATGAACCAACTTCAGGCCTTGATTCCACAGCAGCAAACAGACTCCTTCTCACTCTTCAGGGACTTGCCAAGGGTGGAAGGACCATAATCACAACAATTCACCAGCCATCCAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTTATATCAGAAGGATACCCCATTTACTATGGGAAGGCCAAGGACTCAATGCAGTACTTTTCATCGTTGAGTTTCACCCCGGAAATACCAATGAATCCTGCAGAATTCATGCTTGACTTGGCAACTGGACAAGTGAATAACATAAGCTTTCCTCAAGATACTTTCAAAGATCAAGAATCTGCCGACCGCTCAAAATCTGTTATTAAATATCTACAACTCAAGTATAAGGAAACACTGGAACCAAAAGAAAAAGATGAGAATCATGGAGCAGCAAACACACCAGAACATCTTCAGCTTGCCATTCAGGTTAAAAAGGACTGGACAGTGAGTTGGTTGGACCAATTCTTCATTCTTTACAAGAGAACATTCAGAGCAAGATGCAAGGACTATTTTGATAAATTAAGATTAGTTCAAGCACTTGGCATTGCTCTTTTGTTGGGGCTACTTTGGTGGAAATCCTCAACCAATACAGAGGCTCAAGTTAGAGATCAGGTTGGATTAATGTTCTATATCTGTATATTCTGGACATCTTCATGCATTTTTGGAGCAGTCTATGTCTTTCCATTTGAAAAGGTCTATTTGGTGAAAGAAAGGAAAGCAGATATGTATAGACTGAGTGTATACTACGTAAGCAGCACTCTGTGTGATATGGTGGCGCATGTTTTTTACCCTACTTTCTTCATGCTTATCTTGTACTTCATGGCTGGGTTTAAGAGGACTGTTGCTTGCTTCTTCCTGACTTTGTTCGCGGTGCTGCTAATAGCTATAACAAGTCAAGGAGCAGGAGAACTATTTGGAGCTGCAGTAATGAGCATTCAAAGAGCAGGGATAGTTGCTTCTTTGATACTAATGTTGTTCCTTCTCACCGGTGGCTACTATGTCCAGCACGTACCGAAGGTGATGCAGTGGTTGAAGTATTTATCATTCGTGTACTATGGCTTCAGACTTCTTCTGAAAGTGCAGTATTCAGGAGAACAACTATATGAGTGTGAAAGCGAGAGAGGGTGCAGAACACTGCAGAGTTCACCATCATTTGACACAGTAAACTTGAATGGAGGCTTAACTGAAGCATGGATTATGGTAGCCATGGCTCTGTGCTTCCGTGTCTTGGCCTACTTCTGTCTCCGCAGACGAATTGAAGTTCGAAATTAG 2118 0.4226 MDMAVLILDFNEFSLASKIMENEREDEIEDMSTSPPSLGSLQFAGSNGFGHSMEFMSQAYLPNVYTDIDIKIEDSNFNQDPPLPIYLKFEDVEYKVRASQAASTNPVKSVMSKVAIQHNLGEDKYKKILKGMTGSIGPGEILALMGPSGSGKTTLLRVVGGRLVENVKGKITYNDVRFNAAVKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPGNMSEQQKYARVETTIKELGLERCRHTKIGGGYLKSISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTAANRLLLTLQGLAKGGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGKAKDSMQYFSSLSFTPEIPMNPAEFMLDLATGQVNNISFPQDTFKDQESADRSKSVIKYLQLKYKETLEPKEKDENHGAANTPEHLQLAIQVKKDWTVSWLDQFFILYKRTFRARCKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAQVRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLVKERKADMYRLSVYYVSSTLCDMVAHVFYPTFFMLILYFMAGFKRTVACFFLTLFAVLLIAITSQGAGELFGAAVMSIQRAGIVASLILMLFLLTGGYYVQHVPKVMQWLKYLSFVYYGFRLLLKVQYSGEQLYECESERGCRTLQSSPSFDTVNLNGGLTEAWIMVAMALCFRVLAYFCLRRRIEVRN 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01090 705 Gene3D - 112 346 IPR027417 -
Vian7g01090 705 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 87 351 IPR003439 GO:0005524
Vian7g01090 705 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 72 693 - -
Vian7g01090 705 SMART AAA_5 138 329 IPR003593 GO:0016887
Vian7g01090 705 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 343 IPR027417 -
Vian7g01090 705 Pfam ABC-2 type transporter 308 369 IPR043926 GO:0140359
Vian7g01090 705 FunFam ABC transporter G family member 22 116 345 - -
Vian7g01090 705 Pfam ABC-2 type transporter 436 644 IPR013525 GO:0016020|GO:0140359
Vian7g01090 705 Pfam ABC transporter 129 279 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01090 Vian-Chr7 19126735 19131303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01090 127 312 Calmodulin-binding Proteins AT2G36910 29.319 1.07e-11 66.6