Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01078 ATGCCATTAATCCTAAATCTCACACCATTCGCCGGACCTACCACGACTCTCCGATCTCCGGCCAGTGTCACGACGGTCAGGGCATTCACGGCGACGATCGATTCCCGGAGGCCGGCGAGCCTCTACGAAGTTCTCCGGATCAAGCAGAACGCGTCGGCGGTGGAGATAAAATCGGCGTACCGGAACCTGGCGAAGGTGTACCACCCTGATTCCGCGCTCCGGCGATCGGAATCGGACGAAAGGGACTTCATCGAGATCCACGACGCGTACCAGACGCTGTCGGATCCGTCGGCGAGAGCCGTGTACGATCTGTCGTTGACGGCGGCGCGTGGCGGTAGTGGCTCCTTCACTTCTTTGGTGGCCCCCGATGGGTCTTCCCGGTTGTACTACCAGACCCGCAAGTGGGAAACGGATCAGTGCTGGTAG 426 0.6033 MPLILNLTPFAGPTTTLRSPASVTTVRAFTATIDSRRPASLYEVLRIKQNASAVEIKSAYRNLAKVYHPDSALRRSESDERDFIEIHDAYQTLSDPSARAVYDLSLTAARGGSGSFTSLVAPDGSSRLYYQTRKWETDQCW 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01078 141 PRINTS DnaJ domain signature 78 98 IPR001623 -
Vian7g01078 141 PRINTS DnaJ domain signature 60 75 IPR001623 -
Vian7g01078 141 PRINTS DnaJ domain signature 42 60 IPR001623 -
Vian7g01078 141 ProSitePatterns Nt-dnaJ domain signature. 83 102 IPR018253 -
Vian7g01078 141 ProSiteProfiles dnaJ domain profile. 40 106 IPR001623 -
Vian7g01078 141 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 24 141 - -
Vian7g01078 141 Pfam DnaJ domain 41 103 IPR001623 -
Vian7g01078 141 CDD DnaJ 42 95 IPR001623 -
Vian7g01078 141 SUPERFAMILY Chaperone J-domain 40 116 IPR036869 -
Vian7g01078 141 Gene3D DnaJ domain 28 117 IPR036869 -
Vian7g01078 141 SMART dnaj_3 39 98 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01078 Vian-Chr7 18987131 18987556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01078 42 103 C2H2 Transcription Factor Family AT1G74250 43.939 1.01e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01078 - - gmx:100786034 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01078 7 18987131 18987556 Vian7g01078 7 18987131 18987556 ECH
Vian6g00534 6 20715202 20715660 Vian7g01078 7 18987131 18987556 PCT