Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01059 ATGTCTTCTACTACTTCTTCTTCTTCCTCGTCATCATCGTCATCATCAACTTCAGCCCCATATGATGTTGTTGCTGCTCCTGATATCCCTGGCCCTAGTACGAGGAGAACCGCTCAATTTGAAGGTCCTTCCTCCTCTCGTCAACGTCCTATGAATGAGGTCTTGCCTGAGCCTTTTCTTGAAGCTTTGGCCAACCAAGTCGCCATTGATGCTGCTAACTACAATGGACGTCTTGCTGCTGCTCAGGCCCTTGCATATTTTTTTCGGTCCCGAGTATCTGTTTTTCTGCTACGCGATGTCATTGCTATGGTTTGCTTGGTTCCTGACGCGAATGATGGTTACCTCTCTGCTCCCTCCCAGCTAGCTGAGCTGATTAACGAAAAGCAGGTTTGTTCCACGTGGCGGGAGGTGTCGCGCTCGGATCTGCTGTGGGAGCACCTCACGAGGCGCATCTGGCGAAGGACGTTCCGAGTGAGGGACACGTGGCACACCGAGTACATCAACTGGCATCGGACGGCTACGAACTTCGAGACTGGAAGGCTGTCGTTTATGACTCCGCGCTTTGATCCTTCGGAGCATCGCCGGGGCTTGATCTGCCGCTGCCTCTCCCTTTCCGACACCCGCCTCGCGTGCGGCTTCGTAGACGGCACCGTGCGGGTCTTCGACCTCGAAACCTACGACCACGTCAGCACCTACCTGTCCGACCACGGCCACCTCTTCGGGCCCTACTCGCGCTCTGTCTCGGGAATCATTATCACCGACTCCGACATCACCTTCGCCAGGCTGGACGGGGACATCTATGTGGACGCTATCAACGTGCATGGGCAGAGCCAAGCGCGGCGGGTCGTGTCGGGGTTCGTGATGAACAGCGGGGTCTTGGTCGGGTTCGCGGGAACGCGGCGGCGGTGGGTGGGTCTGTTCGCGGGGATAGCGGAAGGTGCGTTCCAGGTTTGGAACGCGGAGAGCGGGGAGCGCCTGTTCCTTGGGGGGTCGTTAACGGATCCGGAAACGGTTATGGGGTGGCACATGCTGACGGAGTTGGTTGACCCGGTGGGGCGGGTGCGCGTGACGGAGGATGAGTTCGTGGTGGCATGCACTGGTTTGAGGCTGATCTGTTTCAACGCGTGGAACCCGGAGGTTCTTCTGCGGGACGAGATGTCGGCGTCGGGGTTCGTGGTGAGTTCGATGGACGTGAGTTCGGAGGCGTTTGTGGTGGTGGAGCGTGGTGGGGTGGGAACGGTTTGGCGCGTGGGGACGATGGAGTTGATGAGCCGGTTTGTGTTGAGGAGTTCGTGGGTTCGTGGGTTGTGGGGTTGCATGAACCTTGGGTACGTGGTAACCTATTCTCCTAACCCTACGCCATTCTTGAGGGTTTGGAACATTGAGCAAGAAGAAGGACGGCTGTGTGTGAGAGTGTTCCTGCGAGCAGGAGAGGTGAATAGCATGGTGGGTGATGACAGACACGTGGCTATCTCTTCCAACAACATTAACCTATTGGATTTTGGTGTACAGAATCCTTAG 1521 0.5687 MSSTTSSSSSSSSSSSTSAPYDVVAAPDIPGPSTRRTAQFEGPSSSRQRPMNEVLPEPFLEALANQVAIDAANYNGRLAAAQALAYFFRSRVSVFLLRDVIAMVCLVPDANDGYLSAPSQLAELINEKQVCSTWREVSRSDLLWEHLTRRIWRRTFRVRDTWHTEYINWHRTATNFETGRLSFMTPRFDPSEHRRGLICRCLSLSDTRLACGFVDGTVRVFDLETYDHVSTYLSDHGHLFGPYSRSVSGIIITDSDITFARLDGDIYVDAINVHGQSQARRVVSGFVMNSGVLVGFAGTRRRWVGLFAGIAEGAFQVWNAESGERLFLGGSLTDPETVMGWHMLTELVDPVGRVRVTEDEFVVACTGLRLICFNAWNPEVLLRDEMSASGFVVSSMDVSSEAFVVVERGGVGTVWRVGTMELMSRFVLRSSWVRGLWGCMNLGYVVTYSPNPTPFLRVWNIEQEEGRLCVRVFLRAGEVNSMVGDDRHVAISSNNINLLDFGVQNP 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01059 506 MobiDBLite consensus disorder prediction 1 21 - -
Vian7g01059 506 Gene3D - 113 177 - -
Vian7g01059 506 MobiDBLite consensus disorder prediction 37 51 - -
Vian7g01059 506 PANTHER WD40 REPEAT PROTEIN 12, 37 21 464 - -
Vian7g01059 506 SUPERFAMILY WD40 repeat-like 193 493 IPR036322 GO:0005515
Vian7g01059 506 MobiDBLite consensus disorder prediction 1 51 - -
Vian7g01059 506 Gene3D - 191 503 IPR015943 GO:0005515
Vian7g01059 506 SUPERFAMILY F-box domain 123 171 IPR036047 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Vian7g01059 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01059 - - gmx:100807240 616.69