Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01053 ATGTCCCAAGAAAGTATGTCCTCAGCTGGTGGTGATGGTGGTGCCAGCATTGAACTTGGCGCAGCCTTACTTGGTTCTACTACCCTCACCAAGGGGAAGTACAACAGGATATGGCGTAGGAGTTTATACATAAGGTTCCTCATCTCCGTGAAGAAGCCATCAACTTCAAGTTGTAACCATGTCACAGTTGATATAGAAGAGTGCATTAGCAGTGATACTGATGGAATTGTGAAGGACCAGGGCTTGAATTCTCTTCCTGGGCTTGGTGGTCAACGTCAACACACACAGGAGCACGGTGCTGTTGATGAGGGGAACCCCACTGTACCGTTACCAGTTTTAGGAATTGACTTTTCTAAGTCTTTATTGAATAGCTACAAATGCTACCGCTGCACAATCTTGATGCTGTTGGTCGCAGCTGGGTTGTCATTCACCATAGACTTCAAGCAGGAGGGACCTAAACATGGTTGGCATGATGGTGTTGCGATATTATTTGCTCTTGTCCTGCTGGTTCTGGGAAAACCAGTTGCAAACTTTTTTTGTGACAGGAAAAAGTTGAAATTGAAGGAGAGAAAGCAGGAGTTGGAATTCAGAGTGAAACGAGGTGAAGAGTCCGTAGTGGTTCCCGTTCCCGTATCTGATATTGTGGTGGGAGACACAGTTTTCCTGTGGCCAGGCGATGAGGTTCCAGCAGATGGTGAGCTCCAAAGTGATGGTATCCTTTTTGTGGTTGAGCTTGAGAAAATAGAAAGCAAACAGAGGGGGCAGAATTCGTTTCTTAAATCTGGTTCAAAGGTGATCGGGGGCCAGGGAAGGATGTTGGTAAAATCAGTTACAACCAAAACCAATTTGGCTAAGATAGGTACCTGTAATTCTGAAAGGAGGGGTTTGTTGGAAAGACAAATTGAGAAGCCAATTTCTTACATTGACATGGTTGCACTTTCTATCTCTGTACTGGTTGCACTTGCGGTGTTAATTCGCCTAATTTGTGGAAAAGATGGGAGCAATGCAGACTTGCCAGAAATGAAAGGGAAGGTCTCAATTGGCCTGTTTATGAAAGTCCTTGAGAGAACATTTCTAAGACCCCAAGGAAGGGTTTCCATTTTAACAGGTCTTGTCACTGTTGCAACACTTTGCGTTCAGCACGGAATGCCATTTGTGGTTACCATTTCTCTTAAGTACCAGATTGAAAAGGAAGTACGAAACCAAGATGTAGTTCTTAATGATTTGTCCGCTTGTACGACAATGGGGTTGGTAACTGTGATCTGTATTGATGTATCAGGGGAACTCATATATAAACCAATGGAAGTTAGAAGAATATGGATGGGAGAGAAAGATATCAGCATGGTCGAGGGATCTGAAACAGAAAAACCAGTGCTTGACATGCTTAAACTAGGGGTTGGTTTATCAGTCCTAGCACCTGAGATTTATCTTTCCCCTGTGTTCAATTCACTTGTTTGTTGGGCAGAAACAACATGGGAAATGACCATGAGATCTTTCACAGAAGAAAAATTTGACATTCTTAAGCACAGCAAATTGAATTCTGGCAAAGAAGGCAGTGGAGTTTTGGTGAGAAAAATTGGGGATAGTGAAGTTCTGCACTTGCACTGGAGTGGAGCTGCATCCGCAATATTGGAGATGTGTTCGAGATACCATGACAGTAAAGGGAATTGCCACGCCATGGAAAATCAGAAAATCAAATTTGGGCAGGTGATTAAAGAGATGGAGGATAGTGGTCTTACGTCAATTGCTTTTGCTTATAAACAAACAGATGGAGAAGAACTTGGGCAAGAAGAACTGATCTTGTCTGGACTGATAGGCCTGAAAGAAACTAGTCAAGAATCCATAAAATCAGCTTTGGAAAATTTCAGAAATGCTGAAAATGTACAGATCAAACTGGTCTCAGAGGATGGCATCGAGAAACTGGAAGGCATTGCTCGTGAACTAGGACTAGAACATGATGTTGTGCTAGAAGGTAAACAACTTCAAGATTTGAATGAGGAAGCTAGATTGGTCGAAGTGGATCGAGCCCATGTAATGGCAAGATTCCTTCCTGAGGACAAACTTCTCATGATACAGTGCTTGCAAGAGAAAGGCAAGGTGGTTGCATTCATTGGGACAAGGTTGAGAACTAGTCTTACTTCAGTTCTAAAAGTAGCTGACGTGGGGATAGTGCTTGATTCTTTAAGCACAAGAGTGGATAGAGATAGTTGTGACATATCTATCAAATGCTTCAGTGCATTGAAACCCGTTGTGATAGCTGGCAGAAGTAAATACCACAATATTCAGAAGTTCATTCAACTTCAGCTGACATGTACCATATCAGGATTAGTCATAACCTTCATCACAGCCTGTACTGGAGATTCCCCGCTTGCACCGTTCCAGTTGATTTGGGTGAATGTTTTTGTGTGCATTCTGGGTGGCCTAATGATGGTAATGAAGTTAACCAACGAGGAACAACTTGTTAAACAACCATCTGATCACAGGAACCAAAATATAATAGCTAAGGAAATCTGGAAAAGCATTGCTATTCAGGTACTATATCAGACTTCTGTATCAATGATACTTGAGTTTGGGGGACACGTTACTGACCGGGAGAAAAAAGTTAGAGAAACCATGATCTTTAACACCTTCTTATTGTGCCAGATAGTCAATCTGCTCAACACCATGAAGTTGTTGAGAAAGGAAGTTCTTGTTCAGAGCTTCTATTTCTTGGGGGCCTTGGTTATCTGTTTTCTCATGCAAGTGGTGGCGATTGAGTATGCTAAAGGCCTGTCAGATTGCATGCACCTGAATGCTACGAGATGGGTTATCTGTGTCATGATTGGAGCTCTTGCATGGGTTTTTGAGTGGAGCATGAGGAATATTCTTCCAGTTATTCTGAATCCCAGCACCAATTATTCTTCCGAATTCAATACTTCACCTTCTTTCTTTCTTTCTCCATCTTTTCCATTTCTGATGCTACTTTTGCTCCCCATAGGACTGATTTTTAGTCAAATGGGAATGAACATGACACTTCGTTAG 3021 0.4234 MSQESMSSAGGDGGASIELGAALLGSTTLTKGKYNRIWRRSLYIRFLISVKKPSTSSCNHVTVDIEECISSDTDGIVKDQGLNSLPGLGGQRQHTQEHGAVDEGNPTVPLPVLGIDFSKSLLNSYKCYRCTILMLLVAAGLSFTIDFKQEGPKHGWHDGVAILFALVLLVLGKPVANFFCDRKKLKLKERKQELEFRVKRGEESVVVPVPVSDIVVGDTVFLWPGDEVPADGELQSDGILFVVELEKIESKQRGQNSFLKSGSKVIGGQGRMLVKSVTTKTNLAKIGTCNSERRGLLERQIEKPISYIDMVALSISVLVALAVLIRLICGKDGSNADLPEMKGKVSIGLFMKVLERTFLRPQGRVSILTGLVTVATLCVQHGMPFVVTISLKYQIEKEVRNQDVVLNDLSACTTMGLVTVICIDVSGELIYKPMEVRRIWMGEKDISMVEGSETEKPVLDMLKLGVGLSVLAPEIYLSPVFNSLVCWAETTWEMTMRSFTEEKFDILKHSKLNSGKEGSGVLVRKIGDSEVLHLHWSGAASAILEMCSRYHDSKGNCHAMENQKIKFGQVIKEMEDSGLTSIAFAYKQTDGEELGQEELILSGLIGLKETSQESIKSALENFRNAENVQIKLVSEDGIEKLEGIARELGLEHDVVLEGKQLQDLNEEARLVEVDRAHVMARFLPEDKLLMIQCLQEKGKVVAFIGTRLRTSLTSVLKVADVGIVLDSLSTRVDRDSCDISIKCFSALKPVVIAGRSKYHNIQKFIQLQLTCTISGLVITFITACTGDSPLAPFQLIWVNVFVCILGGLMMVMKLTNEEQLVKQPSDHRNQNIIAKEIWKSIAIQVLYQTSVSMILEFGGHVTDREKKVRETMIFNTFLLCQIVNLLNTMKLLRKEVLVQSFYFLGALVICFLMQVVAIEYAKGLSDCMHLNATRWVICVMIGALAWVFEWSMRNILPVILNPSTNYSSEFNTSPSFFLSPSFPFLMLLLLPIGLIFSQMGMNMTLR 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01053 1006 SUPERFAMILY Calcium ATPase, transduction domain A 202 286 IPR008250 -
Vian7g01053 1006 PANTHER CATION TRANSPORTING ATPASE 126 955 - -
Vian7g01053 1006 Pfam E1-E2 ATPase 202 325 - -
Vian7g01053 1006 Gene3D - 179 268 - -
Vian7g01053 1006 Gene3D - 487 603 IPR023299 GO:0000166
Vian7g01053 1006 SUPERFAMILY Calcium ATPase, transmembrane domain M 131 956 IPR023298 -
Vian7g01053 1006 FunFam - 744 963 - -
Vian7g01053 1006 Gene3D - 745 860 - -
Vian7g01053 1006 Pfam Cation transporting ATPase, C-terminus 788 949 IPR006068 -
Vian7g01053 1006 Gene3D - 604 744 IPR023214 -
Vian7g01053 1006 Gene3D - 269 438 - -
Vian7g01053 1006 Gene3D - 861 957 - -
Vian7g01053 1006 SUPERFAMILY HAD-like 421 806 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01053 Vian-Chr7 18703719 18706927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01053 74 985 Primary Pumps ATPases AT3G63380 32.173 3.35e-126 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01053 K01537 - gmx:102661547 1236.09