Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01042 ATGCAGGCATCAGAGCAACATAGAAGTTCAAGCATGTACTATCAACCATTACAACAAATTGAAGCCTACTGCTTGCCGCAGTATGGGAACCTTAATCAACAGCTATATTACCATGGTGGAAGCCATGGAACTCACTTTTCAACTCCAAGTTCTTCTGAACTTTACTGTACATTGGAATCATCCTCTGTAGCTGGCAGTTTCACCCTTTACAACTCTCCTTCAACTGTTAGTTTCTCACCTAATGGTAGCCCCATATCACAGCATGACTCTCAGTCATATCCACCTGACCAGTATCATTCTCCTGAGAATGCCTATGGCTCTCCATTGAGTGGCTCCTGCATAACCGATGATTTAAGCAGCTTCAAGCACAAACTGAGAGAGTTGGAAAGTGTAATGCTTGGCCCTGACTCTGATAATCTTGATAGTTATGACAGTGCCATAAGCAATGGAAACAACTTTGCTTCACTTGAGATGGACAGCTGGAGACAAACAATGGTGGCAATTTCTAGCAAAAACCTGAAGCACATCCTTGTTGCATGTGCCAAAGCCATTGCAGACAATGATTTGCTTATGGCACAGTGGCTGATGGATGAACTAAGGCAGATGGTGTCAGTTTCTGGCGATCCAATTCAACGGTTGGGAGCATACATGCTGGAAGGACTTGTTGCACGATTGGCTGCTTCTGGGAGTTCGATATACAAAGCTTTAAGATGCAAAGAACCAGAGAGTGCTGAGCTTCTCTCCTACATGCACATACTGTATGAGGTTTGCCCCTACTTCAAATTCGGGTACATGTCTGCAAATGGAGCCATTGCAGAAGCTATGAAAGATGAAGAAAGGGTGCACATAATCGATTTCCAAATCGGTCAAGGAAGCCAGTGGATAACTTTAATTCAGGCTTTTGCAGCTAGACCTGGAGGGCCACCCCACATTCGGATTACAGGTATTGATGACTCACAATCAGCTTATGCCCGCGGTGGTGGACTGCACATAGTGGGAAGGAGGTTATCAAAGCTTGCTGAGCATTTTAAGGTGCCGTTTGAATTTCATGCTGCAGCTATCTCTGGCTGTGATGTTCAACTACACAACCTTGGAGTTCGACCGGGGGAAGCTCTGGCTGTGAATTTTGCATTCATGCTACATCACATGCCAGATGAAAGTGTGAGTACACAGAATCACAGGGATAGGTTGTTGAGGTTGGTTAGGAGCCTATCGCCGAAGGTGGTGACACTTGTTGAGCAGGAATCTAACACAAACACTGCTGCATTCTTTCCTCGTTTCCTTGAAACTCTGGACTATTACACAGCAATGTTTGAGTCAATAGATGTTACTCTTCCTAGAATTCATAAAGAGAGAATCAATGTTGAGCAGCATTGTTTGGCAAGAGATTTGGTTAACATCATAGCTTGTGAAGGGGTTGAGAGGGTGGAACGGCATGAGGTGCTTGGGAAGTGGAGGTCAAGATTTGCAATGGCCGGTTTCACTCCTTACCCTTTGAGTTCACTGGTGAATGGTACCATCAAGAAATTGCTTGAGAACTACAGTAATAGATATAGACTTGAAGAGAGAGATGGAGCTCTGTATCTGGGTTGGATGAATAGAGATTTGGTTGCTTCTTGCGCATGGAAATGA 1632 0.4449 MQASEQHRSSSMYYQPLQQIEAYCLPQYGNLNQQLYYHGGSHGTHFSTPSSSELYCTLESSSVAGSFTLYNSPSTVSFSPNGSPISQHDSQSYPPDQYHSPENAYGSPLSGSCITDDLSSFKHKLRELESVMLGPDSDNLDSYDSAISNGNNFASLEMDSWRQTMVAISSKNLKHILVACAKAIADNDLLMAQWLMDELRQMVSVSGDPIQRLGAYMLEGLVARLAASGSSIYKALRCKEPESAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEERVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSQSAYARGGGLHIVGRRLSKLAEHFKVPFEFHAAAISGCDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVRSLSPKVVTLVEQESNTNTAAFFPRFLETLDYYTAMFESIDVTLPRIHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSNRYRLEERDGALYLGWMNRDLVASCAWK 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01042 543 ProSiteProfiles GRAS family profile. 164 543 IPR005202 -
Vian7g01042 543 MobiDBLite consensus disorder prediction 78 101 - -
Vian7g01042 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 149 537 IPR005202 -
Vian7g01042 543 Pfam GRAS domain family 173 543 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01042 Vian-Chr7 18628356 18629987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01042 12 543 GRAS Transcription Factor Family AT5G48150 66.729 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vian7g01042 GRAS 1.9e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01042 - - gmx:100808300 1037.33