Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00988 ATGGGATGTGCCAGCTCCAAGCTGGACGATCTCCCGGCGGTGGCGCTCTGCCGGGAACGCTGTGTTTTTCTCGACGAAGCAATCCACCAGCGCTACGCACTCGCCGCGGCCCACATCGCTTACATAAACTCCCTCAAGGCAATTGGTCACTCCCTCCACTCCTTCGTCCACCACGACACCCAGAGGCCGGCGCCGCCGTCTCCTTCTTCCTCCCCCTCTCCCTCTCCCTCTCCTCCCCACAAAACCCACCAGCTTTCCAAGCACGCCTCTCCCGCCCACTCCGATTCTGCCGGCTCCCACCTCCACTTCCACTCCGACTCCGATGATCTCTCTCTCCACCATTCCCCCCAAGCCTCCCCCATTCGTCTCCCTGCTTTCTACAACAATTCCCAACCACCGGATCACCACCTTCACATCAATTACATGAAGAACAAGGCCGCCCCTTCAATTGTCTACGAGCAGAGGCCTCTCAGTCCCGAAACCGGCTACCTCGGAGAGTCTTCTTCCTCCTTTTACCCTTACGCTTCCTCCTCCTACCCCTCCTACCCGTACGCCTATGATCCATATTCTGCCCCTCCCTACCCCGGATCTTCCCAGCCCCAACCCCAACCCCAGCGCCATCCCAACTCCAAACCCCCTCCCCCTCCCCCCTCCCCTCCCCGGGCCTCCACCTGGGACTTCCTCAACTTCTTCGATAACACTTACGACACCCAAGCTCATTACACCGCCACTCCCAGCCGTGACTCCAGGGAGCTCCGGGAGGAGGAGGGCATCCCCGATTTGGAAGACGAGGATTACCACCACCACGAAGTCGTCAAGCAAGTTCACGGGGATCAGAAGCTCGTCGAACCTAAGCCCCAACCCCCCAACCCCCACCACAACCACCTCCACGAGGAGGAGGATGAAGAAGAGGAAGATGAAGATGAGGTGGAGTATGAAGTTCACGTCGTCGATAAGAAAGTGGTTGATGCCGATAATGATGGTAACAACAAACCCAAGGACCACGCCGCATTCCGGAGCCGCCGACCTGGCTCCCGGAATCCCCTCGAGGTCGCTAAAGAGATTCAGGATCTCTTTCAGAGGGCTTCTGATTCCGGTGCCCTAATCGCTAAGATCCTCGAGGTGGGCAAGCTTCCCCACAATCGAAAGCACGCCGCCTATCAAGCTTCTTCCAAGATGTTACAAGTTGTTTCTCCCTCGCTGTCTCTTATTTCCTCCCAACCATCTACTTCTAAAGATGCCGAATCCGCCTCTAACATGGATGTTGATGCTGATCTAATAACTGGAGCACGCAATCTTTCCTCGACACTGCATAAGCTCCTACTTTGGGAGAAGAAACTCTATAATGAAGTTAAGGCTGAGGAAAAGATGCGGGTAATCCATGATAGGAAGCTTCGCAAGCTGAAGCGTATGGATGATAGGGGAGCTGATTTTCATAAAGTTGGTGCGACTCGGACTTTGATTAGGAGTCTGTCCACAAAAATAAGAATGGCAATTCAGGTTGTGGATAAGATTTCTATGACAATAAATAAGATAAGAGATGAAGAACTGTGGCCACAGCTGAAGGAATTGATCCAAGGGTTGACCAGAATGTGGAAATCCATGCTTGAATGCCATCATAATCAGTGTGAAGCTATTAGAGAAGCCAGAATACTGGGTTCCGTTGGATCCAGGATAAAGAGTGGTGGTGATAGTCATCTTCAAGCGACGAAGCAACTTGAACAAGAGCTCATCAATTGGACTTTCCAATTTTCTGGCTGGATAAGTGCCCAGAAAGGTTATGTTAGAGCATTGAATAATTGGCTGCTGAAATGTCTCCTGTACGAACCAGAAGAAACACCTGATGGCATAGTCCCCTTTTCCCCTGGTAGGATTGGGGCTCCGCAAATATTTGTAATATGCAATCAGTGGTCCCAAGCTTTGGATAGAATATCTGAGAAGGAAGTTGTTGATTCCATGCATGTATTTACGATGAGTGTGCTTCAGATATGGGAACAAGATAAGCTAGAAATGCATAGGCAGATGAACCAGAACAAGGATCTTGAGAGGAAGGTTAGAAACATAGATAGAGATGACCAGAAGTTGCAGAAGCAAATTCAAGCGTTAGAGCGAAAGGTGCTTCTGCTATCTGGGGAAGGTAAAGGTCTCTCAGTTTCTGAGAACATCATTTATCAGAGTGACAAAAGCAGTAGTCTACAGGCTAGTTTGCAGCGCATTTTTGAGGCCATGGAGAGATTTACCGACGAATCTGTGAGAGCTTATGAGGAATTATTACAACGGGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAGAAGGAGAAAGAGCAGGCGTACGGAACACACCAGAGGACTTCTGCCGGAGATGGAGAGGGAGATGGAGACAAAGAGGGGGTTGATTTCTCCTTTGCCGAGTTCTCGCTGCCGGAGCTCAAGGCGGCCACCAACAATTTCAGCTCAGAGTATATCGTCTCGGAGAGTGGTGACAAGGCGCCTAACCTCGTCTACAAGGGTCGTCTCCAGAACCAGAGCCGTTGGATTGCAGTCAAGAAGTTCAGCAAGGCTGCCTGGCCGGATCCCAAGCAATTCGTTGAAGAGGCTTCCGGCGTTGGCAAGTTGCGCCACCCAAGGCTCGCTAATTTAATCGGTTACTGTTGCGACGGCGATGAGAGGCTCCTCGTTGCGGAGTACATGCCCAATGACACTCTCGCCAAGCATCTCTTCCACTGGGAAACTCAGACCATTGAGTGGGCCATGCGCTTGCGGGTTGCTCTGTACATCGCTCAGGCTTTGCATTATTGCAGTTCGGAGGGGCGCCCCCTGTACCATGACTTGAATGCTTACCGTGTTCTCTTCGACCAGGAAGGTGATCCTCGTCTCTCTTGTTTCGGTTTTATGAAGAACAGCAGGGATGGCAAGAGTTATAGCACCAATCTTGCTTATACACCTCCTGAATATTTAAGAAACGGAAGGGTCACCCCTGAAAGTGTAATTTACAGCTTTGGAACTGTCCTTCTAGACCTCCTCAGTGGCAAACACATTCCTCCCAGTCATGCACTTGATATGATACAGGGGAAGAACAATATGCTCTTAATGGATTCACATTTGGAGGGAAAGTTTTCAACAGAAGAAGCGACAGTGGTTGTTAATCTTGCCTCCAAATGCTTGCAATATGAACCGAGGGAGCGGCCTGATACAAAAGATTTGGTCACAACACTTGCCCCATTGCACACAAAACCCGATGTTCGTTCTCACATAATGCTTGGAATTCCAAAGCATGAGGAAGCTCCATCAACCCCACAACGTCCTCTTTCAGCAATGGGAGAGGCTTGTTCAAGAATGGACCTTACTGCAATACATCAGATCTTGGTCGCGACACACTACAGAGATGATGAAGGAACTAATGAGCTGTCGTTCCAAGAGTGGACTCAACAGATGAGAGATATGCTGGAGGCAAGGAAGCGTGGAGACTATGCATTCCGTGACAAAGATTTCAAGACAGCCATTGATAACTATTCCCAGTTTATTGATGTGGGAACGATGGTCTCCCCAACTGTTTTTGCGAGACGCAGTCTATGCTATCTGTTATGTGATCAACCAGATCCTGCACTACGTGACGCAATGCAAGCACAGTGCGTTTATCCAGACTGGCCGACGGCTTTCTACATGCAATCAGTTGCTCTTGCGAAGCTGGACATGCACAAGGATGCGGCTGATATGTTAAATGAGGCAGCTGCATTGGAAGAGAAGAGACAAAGAGGAACAAGAGGATCGTAA 3774 0.5 MGCASSKLDDLPAVALCRERCVFLDEAIHQRYALAAAHIAYINSLKAIGHSLHSFVHHDTQRPAPPSPSSSPSPSPSPPHKTHQLSKHASPAHSDSAGSHLHFHSDSDDLSLHHSPQASPIRLPAFYNNSQPPDHHLHINYMKNKAAPSIVYEQRPLSPETGYLGESSSSFYPYASSSYPSYPYAYDPYSAPPYPGSSQPQPQPQRHPNSKPPPPPPSPPRASTWDFLNFFDNTYDTQAHYTATPSRDSRELREEEGIPDLEDEDYHHHEVVKQVHGDQKLVEPKPQPPNPHHNHLHEEEDEEEEDEDEVEYEVHVVDKKVVDADNDGNNKPKDHAAFRSRRPGSRNPLEVAKEIQDLFQRASDSGALIAKILEVGKLPHNRKHAAYQASSKMLQVVSPSLSLISSQPSTSKDAESASNMDVDADLITGARNLSSTLHKLLLWEKKLYNEVKAEEKMRVIHDRKLRKLKRMDDRGADFHKVGATRTLIRSLSTKIRMAIQVVDKISMTINKIRDEELWPQLKELIQGLTRMWKSMLECHHNQCEAIREARILGSVGSRIKSGGDSHLQATKQLEQELINWTFQFSGWISAQKGYVRALNNWLLKCLLYEPEETPDGIVPFSPGRIGAPQIFVICNQWSQALDRISEKEVVDSMHVFTMSVLQIWEQDKLEMHRQMNQNKDLERKVRNIDRDDQKLQKQIQALERKVLLLSGEGKGLSVSENIIYQSDKSSSLQASLQRIFEAMERFTDESVRAYEELLQREKEKEKEKEKEKEKEQAYGTHQRTSAGDGEGDGDKEGVDFSFAEFSLPELKAATNNFSSEYIVSESGDKAPNLVYKGRLQNQSRWIAVKKFSKAAWPDPKQFVEEASGVGKLRHPRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWETQTIEWAMRLRVALYIAQALHYCSSEGRPLYHDLNAYRVLFDQEGDPRLSCFGFMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKNNMLLMDSHLEGKFSTEEATVVVNLASKCLQYEPRERPDTKDLVTTLAPLHTKPDVRSHIMLGIPKHEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMHKDAADMLNEAAALEEKRQRGTRGS 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00988 1257 Pfam Protein kinase domain 834 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00988 1257 MobiDBLite consensus disorder prediction 65 79 - -
Vian7g00988 1257 FunFam probable serine/threonine-protein kinase At4g35230 1146 1255 - -
Vian7g00988 1257 ProSiteProfiles Protein kinase domain profile. 820 1087 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00988 1257 MobiDBLite consensus disorder prediction 57 129 - -
Vian7g00988 1257 MobiDBLite consensus disorder prediction 323 341 - -
Vian7g00988 1257 Gene3D Transferase(Phosphotransferase) domain 1 898 1089 - -
Vian7g00988 1257 SUPERFAMILY TPR-like 1149 1251 IPR011990 GO:0005515
Vian7g00988 1257 MobiDBLite consensus disorder prediction 323 348 - -
Vian7g00988 1257 MobiDBLite consensus disorder prediction 190 222 - -
Vian7g00988 1257 FunFam probable serine/threonine-protein kinase At4g35230 792 896 - -
Vian7g00988 1257 MobiDBLite consensus disorder prediction 273 310 - -
Vian7g00988 1257 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vian7g00988 1257 Gene3D Phosphorylase Kinase; domain 1 793 896 - -
Vian7g00988 1257 MobiDBLite consensus disorder prediction 190 226 - -
Vian7g00988 1257 Gene3D Tetratricopeptide repeat domain 1146 1255 IPR011990 GO:0005515
Vian7g00988 1257 FunFam probable serine/threonine-protein kinase At5g41260 898 1089 - -
Vian7g00988 1257 Coils Coil 751 778 - -
Vian7g00988 1257 MobiDBLite consensus disorder prediction 761 779 - -
Vian7g00988 1257 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 770 1252 IPR045845 GO:0004672|GO:0009742
Vian7g00988 1257 Coils Coil 671 712 - -
Vian7g00988 1257 SUPERFAMILY Protein kinase-like (PK-like) 801 1076 IPR011009 -
Vian7g00988 1257 MobiDBLite consensus disorder prediction 761 793 - -
Vian7g00988 1257 Pfam Protein of unknown function (DUF632) 350 660 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00988 Vian-Chr7 18206318 18221100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00988 1 681 Acyl Lipid Metabolism Gene Families AT2G27090 26.829 2.08e-58 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Vian7g00988 DUF632 7.3e-111 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00988 K14500 - aprc:113847989 1951.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00988 7 18206318 18221100 Vian7g00988 7 18206318 18221100 ECH