Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00958 ATGAGGAGCGGAGAGGAGAGACAGACGGCAACGGGGATTCGGAAGAAGGGAAGCGGAATCAGGCAATGGCTGCTGCTCGACGGGAAAGGAGAGACGGAGGTGGTGGAGGCTGGGAAGCACGCCATCATGAAGCGCACCGGCCTCCCTGCCCGTGACCTCCGCATATTGGACCCTCTCCTCTCCTACCCTTCCACCCTTCTTGGCCGTGAGAGGGCCATCGTCATCAACTTGGAGCACATCAAGGCCATCATCACCGCCCAAGAGGTTCTCCTCCTCAACTCACGTGACCCCTCTGTCACCCCCTTCGTCCACGAGCTCCAGGCCAGGATTCTCCGCCATCACCAGGCCTCCTCCCCTTGCAAAAACCACGACCACTACACCAACTACGAGCCCGACCGCGACCACGACCCCGATGCCATCAAGATTATCCCTTTCGAGTTCGTAGCCCTGGAGGCCTGCCTTGAATCCGCCTGTAGCGTATTGGAGAACGAAGCAAAGACGTTGGAGCAGGAGGCTCATCCCGCCTTGGACAAGCTCACATCCAAGATCAGTACTCTCAATTTGGAACGCGTTCGTCAAATTAAGAGCCGATTAGTCGCCATCACTGGGCGTGTTCAGAAGGTGAGGGATGAATTGGAGCACTTGCTGGACGACGACGAAGATATGGCCGAGATGTATCGGACAGAAAAGTTAGCCGAACAGCAGATGAAAGAGAGCTCTTCCACATCCTCCATAAATGACCACGACGAGACCGTTCCAGAAATATCCTTTGAGCCTGGAGGACCCCCTGAGGGCTTGGAGGATCATCACAGTGTCTACAATGTTCTTGGTAGGGACAACCATGGAACCCGTGGTAGCACCTACAGTGCCGTCACCAAGCAGCTTGATGTCGAGGAGCTTGAAATGCTTTTGGAGGCTTACTTTGTGCAGATCGATGGCACCTTGAACAAGCTCTCGACGCTGAGGGAATATGTTGATGACACGGAGGATTACATCAATATCATGCTGGATGACAAACAGAACCATCTCCTCCAAATGGGAGTCATGTTGACCACAGCAACTCTGGTAGTGAGTGGCTTTGTTGTTGTGGCCGGAGTTTTCGGCATGAATATTCACATTGAGCTATTTGATCCCGATAAAGCCGGGATGACAGAGTTCCTCTGGACTGTTGGTGGTAGCACTGCAGGGACCATATTCTTGTATGTAGTTGCCATTGCCTGGTGTAAGCACAAACGTTTGCTGGAATAA 1248 0.5329 MRSGEERQTATGIRKKGSGIRQWLLLDGKGETEVVEAGKHAIMKRTGLPARDLRILDPLLSYPSTLLGRERAIVINLEHIKAIITAQEVLLLNSRDPSVTPFVHELQARILRHHQASSPCKNHDHYTNYEPDRDHDPDAIKIIPFEFVALEACLESACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYRTEKLAEQQMKESSSTSSINDHDETVPEISFEPGGPPEGLEDHHSVYNVLGRDNHGTRGSTYSAVTKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSGFVVVAGVFGMNIHIELFDPDKAGMTEFLWTVGGSTAGTIFLYVVAIAWCKHKRLLE 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00958 415 FunFam Magnesium transporter MRS2-1 11 94 - -
Vian7g00958 415 Pfam CorA-like Mg2+ transporter protein 299 401 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vian7g00958 415 Coils Coil 151 171 - -
Vian7g00958 415 CDD Mrs2_Mfm1p-like 23 413 IPR039204 -
Vian7g00958 415 Gene3D Magnesium transport protein CorA, transmembrane region 97 343 - -
Vian7g00958 415 Gene3D - 9 94 - -
Vian7g00958 415 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 9 414 IPR039204 -
Vian7g00958 415 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00958 Vian-Chr7 17758200 17761014 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00958 23 415 MRS2 Gene Family AT3G19640 64.480 0.0 521