Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00947 ATGGCTGCTGTGGCTGAAGATCCCTACAGGTTCTTCAGCTGGAATGTTACCTACGGAGACATTTATCCACTTGGTGTTCGTCAACAGGGAATACTTATCAACGGTCAATTCCCAGGTCCAGACATTCATTCTGTTACCAACGACAACCTCATCATCAATGTCTTCAACAGCTTGGACCAACCCTTCCTCCTATCCTGGAACGGGGTGCAGCAGAGGAGGAACTCTTTCGAAGACGGGGTTTCGGGAACAACGTGTCCCATTCCTCCAGGAGGGAACTTCACATACATACTTCAGGTGAAGGATCAGATTGGAAGCTTCTACTATTTCCCATCTCTTGCATTCCACAAAGCTGCCGGTGGATTTGGAGGTATTAGGATTTTGAGCAGACCCAGAATTCCGGTCCCTTTCGACGATCCCGCCGGTGATTACACTGTCCTCATCGGAGATTGGTACAAATTCAACCACACGGATTTGCAGGCTATTCTTGATAGAGGTAGCAGGCTGCCTTTCCCTGATGGAATCCTCATCAATGGTCGTGGCTCTAACGGAGCATCTTTCAATGTGGAACAAGGAAAGACGTACAGGCTGAGAATATCAAATGTGGGGTTGGAAAATTCCCTGAATTTCCGCATACAGAACCACAATTTAAAGCTGGTAGAAGTGGAAGGAACGCACACGGTTCAAACAACCTACTCATCTCTTGACGTGCACGTGGGCCAGTCTTACTCTGTTCTGGTCACTGCGGATCAACCTGCTAAGGACTATTACATCGTGGTCTCTTCTCGATTTACATCTACAGTCCTCACCTCCACTGCCATTCTTCGCTACAGCAACTCTGCAGGCCCAGTATCCGGCCCACCCCCTGGTGGACCTACCATTCAGATTGATTGGTCTCTCAACCAGGCCCGCTCCATCAGGACGAACCTGACAGCAAGTGGACCAAGGCCGAACCCGCAAGGGTCGTACCACTACGGTCTGATAAACACGACGAGGACCATCATACTGTCCGGTTCAGCTGGTATAGTGAACGGCAAACAGAGATACGGAATCAACAGCGTGTCTTACGTTGCTCCGGACACTCCTCTGAAGCTCGCAGACTACTTCAAAATCCAAGGTGTTTTCCGTGTCGGAAGCATTTCTGACAGGCCCACTGGAGGTGGCATTTACCTTGACACATCTGTTTTGCAAACCGACTACAGAGCATTTGCGGAGATTGTCCTCCAAAACGACGAAGACGTCATTCAGAGCTACCATCTCGATGGCTACTCTTTCTTTGTGGTTGGTATGGACGGAGGACAGTGGACGACTGCTAGCAGGAACGAGTACAATCTTCGAGATGCAGTTTCGCGGAGCACCACTCAGGTATATCCCAAGTCATGGACTGCTATCTATATTGCGCTTGACAATGTGGGAATGTGGAACTTGAGATCTGAATTTTGGGCACGGCAATACCTTGGCCAACAGTTTTACATGCGCGTTTATACAACATCAACCTCAATCAGAGATGAATATCCTGTTCCAAAGAATGCACTGCTATGTGGTAGAGCAAGTGGGAGACACACTCGACCCCTCTGA 1575 0.4908 MAAVAEDPYRFFSWNVTYGDIYPLGVRQQGILINGQFPGPDIHSVTNDNLIINVFNSLDQPFLLSWNGVQQRRNSFEDGVSGTTCPIPPGGNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFDDPAGDYTVLIGDWYKFNHTDLQAILDRGSRLPFPDGILINGRGSNGASFNVEQGKTYRLRISNVGLENSLNFRIQNHNLKLVEVEGTHTVQTTYSSLDVHVGQSYSVLVTADQPAKDYYIVVSSRFTSTVLTSTAILRYSNSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTRTIILSGSAGIVNGKQRYGINSVSYVAPDTPLKLADYFKIQGVFRVGSISDRPTGGGIYLDTSVLQTDYRAFAEIVLQNDEDVIQSYHLDGYSFFVVGMDGGQWTTASRNEYNLRDAVSRSTTQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQFYMRVYTTSTSIRDEYPVPKNALLCGRASGRHTRPL 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00947 524 FunFam Monocopper oxidase-like protein 140 314 - -
Vian7g00947 524 PANTHER MULTI-COPPER OXIDASE 28 492 IPR045087 -
Vian7g00947 524 FunFam Monocopper oxidase-like protein 326 523 - -
Vian7g00947 524 SUPERFAMILY Cupredoxins 326 515 IPR008972 -
Vian7g00947 524 Gene3D - 325 520 IPR008972 -
Vian7g00947 524 Pfam Multicopper oxidase 360 496 IPR011706 GO:0005507|GO:0016491
Vian7g00947 524 SUPERFAMILY Cupredoxins 136 316 IPR008972 -
Vian7g00947 524 SUPERFAMILY Cupredoxins 4 156 IPR008972 -
Vian7g00947 524 Pfam Multicopper oxidase 142 278 IPR001117 -
Vian7g00947 524 FunFam L-ascorbate oxidase homolog 9 130 - -
Vian7g00947 524 Gene3D - 9 130 IPR008972 -
Vian7g00947 524 CDD CuRO_3_AAO_like_1 358 478 IPR034275 GO:0005507
Vian7g00947 524 CDD CuRO_1_AAO_like_1 11 126 IPR034273 GO:0005507
Vian7g00947 524 Gene3D - 140 315 IPR008972 -
Vian7g00947 524 Pfam Multicopper oxidase 16 129 IPR011707 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00947 Vian-Chr7 17655682 17659352 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00947 - - gmx:100812416 1003.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00947 7 17655682 17659352 Vian7g00947 7 17655682 17659352 ECH
Vian7g00947 7 17655682 17659352 Vian4g02438 4 41030827 41036543 PCT