Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00932 ATGCAGAGACAAGAGGTCAAGTCACCATTGTCTAATATGATTCAGATTGAGCCAGTAAATATGATATTCTGTAGAGTGTATAGGGAGATTGTTGGAAGTACATATTATGTGGCTCCAGAGGTGTTAAGGAGGAGATATGGGAAAGAAATAGATGTGTGGAGTGCGGGAATAATTTTACACATCCTTCTAAGTGGAGTGCCTCCATTTTGGGCTGAAACCGAGAACGGCATATTTGATATAACTTTGGAAGGCAGGCTTGATCTGGAGAGCGCACCATGGCCTTCTATTTCAGCTGCTGCAAAGGATCTGATCAGAAAAATGTTGAATCATGACCCTAAGAAACGCATTACAGCTGCTGAAGCCCTTGAACACCCGTGGATGAAGGAGGGTGGCGAAGCATCTGACATACCTATAGACAATGCTGTTTTAACTAGGATGAAACAGTTCAGAGCAATGAACAAGATGAAGAAACTTGCTCTAAAGGTTATAGCAGAAAACCTTTCAGAGGAGGAAATCAAGGGCTTGAAACAAATGTTCAACAATATGGACACTGATCGCAGTGGCACAATCACATACGAGGAACTCAAGTCTGGATTGACCAAATTGGGATCCAACCTTAGTGAATATGAAATAAAGCAGCTAATGGAAGCTGCTGATGGTGACAATAGTGGAACTATTGACTATCAAGAATTCATCACTGCCACCCTAAACCGGCATATACTGGAGAAGGAAGAGAATCTGTATAAGGCTTTTAAATACTTTGACAGGGATGACTGTGGATATATAACAAGAGAAGAGCTTAGACAAGCATTGACTGAATATCAGATGGGAGCTGAGGCAACTATAGATGAAGTGATCGATGATGTGGATACTGATAACGATGGGAAAATAAATTACCAGGAGTTTGTGGCAATGATGAGAAAGGGGATTCTGGATATTGATGAGAAGGAGAAACCACAATAG 963 0.4123 MQRQEVKSPLSNMIQIEPVNMIFCRVYREIVGSTYYVAPEVLRRRYGKEIDVWSAGIILHILLSGVPPFWAETENGIFDITLEGRLDLESAPWPSISAAAKDLIRKMLNHDPKKRITAAEALEHPWMKEGGEASDIPIDNAVLTRMKQFRAMNKMKKLALKVIAENLSEEEIKGLKQMFNNMDTDRSGTITYEELKSGLTKLGSNLSEYEIKQLMEAADGDNSGTIDYQEFITATLNRHILEKEENLYKAFKYFDRDDCGYITREELRQALTEYQMGAEATIDEVIDDVDTDNDGKINYQEFVAMMRKGILDIDEKEKPQ 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00932 320 ProSiteProfiles EF-hand calcium-binding domain profile. 206 241 IPR002048 GO:0005509
Vian7g00932 320 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 302 - -
Vian7g00932 320 ProSiteProfiles EF-hand calcium-binding domain profile. 170 205 IPR002048 GO:0005509
Vian7g00932 320 FunFam Calcium-dependent protein kinase 1 135 310 - -
Vian7g00932 320 ProSitePatterns EF-hand calcium-binding domain. 219 231 IPR018247 -
Vian7g00932 320 Pfam EF-hand domain pair 175 235 IPR002048 GO:0005509
Vian7g00932 320 Pfam EF-hand domain pair 244 307 IPR002048 GO:0005509
Vian7g00932 320 ProSiteProfiles EF-hand calcium-binding domain profile. 279 312 IPR002048 GO:0005509
Vian7g00932 320 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00932 320 ProSitePatterns EF-hand calcium-binding domain. 290 302 IPR018247 -
Vian7g00932 320 ProSitePatterns EF-hand calcium-binding domain. 183 195 IPR018247 -
Vian7g00932 320 FunFam Calcium-dependent protein kinase SK5 37 132 - -
Vian7g00932 320 SUPERFAMILY Protein kinase-like (PK-like) 26 148 IPR011009 -
Vian7g00932 320 Pfam Protein kinase domain 27 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00932 320 ProSiteProfiles EF-hand calcium-binding domain profile. 242 277 IPR002048 GO:0005509
Vian7g00932 320 SUPERFAMILY EF-hand 166 307 IPR011992 -
Vian7g00932 320 Gene3D Transferase(Phosphotransferase) domain 1 15 131 - -
Vian7g00932 320 Gene3D - 134 309 - -
Vian7g00932 320 SMART serkin_6 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00932 320 SMART efh_1 246 274 IPR002048 GO:0005509
Vian7g00932 320 SMART efh_1 174 202 IPR002048 GO:0005509
Vian7g00932 320 SMART efh_1 210 238 IPR002048 GO:0005509
Vian7g00932 320 SMART efh_1 281 309 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00932 Vian-Chr7 17568168 17570046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00932 21 316 EF-hand Containing Proteins AT1G76040 74.411 7.23e-163 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vian7g00932 Pkinase 6.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00932 K13412 - gmx:100816157 508.449