Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00920 ATGGTTCATCTCACTAAGCTTCTTTCTTCTTCTTCCTATCAGTTTCTTCCTTTTGCATTGTTGCTGTTATCTGTTTCCTTAAAAACAAAGGCTGTGTTGAAACTACCACCGAATGTGTCTGTTCCAGCAGTGTTTGTGTTCGGAGATTCAGTGGTGGACACAGGCAACAACAACAACAGAACGACATCGTTTGCTAGGTCGAATTTCCCTCCGTATGGGAGAGACTTTGAAGGTGGCGTCCCGACTGGTAGATTCAGCAATGGAAAGGTTCCATCAGACCTTATAGTTGAAGAATTGGGAATCAAGGAGCTTCTGCCAGCATATTTAAAGCCAAATCTCGAGGCTAGTGATTTGGTGACAGGGGTCTGTTTTGCTTCAGGTGGCTCAGGATACGACCCTTTGACCTCCATATTAGAGGGATCAATGTCGTTAAGTGGGCAACTTGATCTGTTGAAAGATTACATAGTGAAAGTAAAAGGTTTGGTCGGAGATGAGAGAGCAAAGTTTATCTTAGCCAACAGTCTTTTCATCGTGGTAGCAGGAAGCAGTGACATTTCCAACACCTACCGCACTCGATCTCTCCTCTACGATCTTCCTTCTTACTCTGATCTTCTTCTGAACTCAGCTTCCACCTTTTTGACGGAATTGAATGAGTTAGGTGCAAGGAGGATTGCAGTGTTCAGTGCACCTCCAATTGGGTGTTTGCCATTTCAGAGAACAGTGGGTGGAGGAATGGAGAAAAAGTGTGCACCAAGGCCCAACAATTTGGCCCAATTGTTTAACACCAAATTGTCCAACTTTCTGCGTTCTCTCAATCGTAACTTTCCCAGTAGCAGAAATGTTTTCGTCAATGTTTATGACCCTCTGCTCGACATCATCCTCAATTACCAAAAATATGGGTATAAAGTGGGAGACACTGGATGCTGTGGAACAGGGAGAATAGAGGTTGCAATACTATGCAATAGTTTGGATTCTACGTGTCCGAATGTTGAAGATTATGTGTTTTGGGACAGTTTTCATCCCACAGAAAGCGCTTACAAAAGGCTCATAGCTCCTATTCTTCAAAAATATTTGTACCAATTCAAGTGA 1089 0.4307 MVHLTKLLSSSSYQFLPFALLLLSVSLKTKAVLKLPPNVSVPAVFVFGDSVVDTGNNNNRTTSFARSNFPPYGRDFEGGVPTGRFSNGKVPSDLIVEELGIKELLPAYLKPNLEASDLVTGVCFASGGSGYDPLTSILEGSMSLSGQLDLLKDYIVKVKGLVGDERAKFILANSLFIVVAGSSDISNTYRTRSLLYDLPSYSDLLLNSASTFLTELNELGARRIAVFSAPPIGCLPFQRTVGGGMEKKCAPRPNNLAQLFNTKLSNFLRSLNRNFPSSRNVFVNVYDPLLDIILNYQKYGYKVGDTGCCGTGRIEVAILCNSLDSTCPNVEDYVFWDSFHPTESAYKRLIAPILQKYLYQFK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00920 362 CDD SGNH_plant_lipase_like 42 357 IPR035669 -
Vian7g00920 362 PANTHER GDSL ESTERASE/LIPASE EXL3 24 351 - -
Vian7g00920 362 Gene3D SGNH hydrolase 35 358 IPR036514 -
Vian7g00920 362 FunFam GDSL esterase/lipase APG 33 358 - -
Vian7g00920 362 Pfam GDSL-like Lipase/Acylhydrolase 44 349 IPR001087 GO:0016788
Vian7g00920 362 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 44 55 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00920 Vian-Chr7 17465231 17469918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00920 38 355 Pollen Coat Proteome AT1G75910 40.741 5.17e-71 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00920 - - gmx:102667991 619.387