Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00891 ATGGCCTCATCCACCGGAACCTCTTCCACTTCACCCTCTCAGGACGATCTCCACCTTCTCATGGAACTAAGAAGAAAGAAGAGAAAGCAATCCAACCGTGACTCCGCCAGAAGATCAAGGATGCGAAAGCAGAAGCATTTCGATGATCTCACCGAACAGCTCCAGAGTCTCCAGAAGGAAAATGACCTTATCTTGAACCAACTCAACCTCACCACCCAACACTATCTCAAGCTCCACGCTCTCAACTCCATTCTCGTAGCCCAGAAGACTGAGCTTGCTCAAACCCTTCACTCCTTCAATCACATCATCAAACTCATCAACGATACAAACCATTATTATCATCACCATAACGATAACAAAACCAACAATAATTTCATCATTCCCATGCACACGCCCTTCCTTAATCACCCCATTGTCGCCACTGCAGACAACATGTGTCTGTGGTGA 447 0.4631 MASSTGTSSTSPSQDDLHLLMELRRKKRKQSNRDSARRSRMRKQKHFDDLTEQLQSLQKENDLILNQLNLTTQHYLKLHALNSILVAQKTELAQTLHSFNHIIKLINDTNHYYHHHNDNKTNNNFIIPMHTPFLNHPIVATADNMCLW 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00891 148 SMART brlzneu 20 84 IPR004827 GO:0003700|GO:0006355
Vian7g00891 148 Coils Coil 40 67 - -
Vian7g00891 148 Gene3D - 23 78 - -
Vian7g00891 148 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700|GO:0006355
Vian7g00891 148 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 85 IPR004827 GO:0003700|GO:0006355
Vian7g00891 148 CDD bZIP_plant_GBF1 25 75 IPR045314 GO:0003700|GO:0006355
Vian7g00891 148 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 144 - -
Vian7g00891 148 FunFam BZIP transcription factor 22 73 - -
Vian7g00891 148 SUPERFAMILY Leucine zipper domain 23 79 IPR046347 GO:0003700|GO:0006355
Vian7g00891 148 MobiDBLite consensus disorder prediction 24 49 - -
Vian7g00891 148 Pfam bZIP transcription factor 22 79 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00891 Vian-Chr7 17181918 17182364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00891 12 106 bZIP Transcription Factor Family AT2G18160 51.579 6.94e-26 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian7g00891 bZIP_1 1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00891 K25786 - gmx:778146 160.999