Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00885 ATGACTTTCATCAAGCTCACTCTTCTTGCAATGATAATAGCCTTTTTCTCTGTTAAACTCTCCTGGGCTCACCCTGGCTTTCGTTTCGGCCGGGGTGGTCATCATGGAGGAATATCTTTTGGCCTTTCACCTCAATTCTATCAGTTTTCTTGCCCCCAAGCTAACGACATTGTCATGTCAGTGTTGGAGAAGGCCATTGCAAAAGACATGAGAATGGCTGCTTCTCTACTTCGACTTCACTTTCATGATTGCTTTGTACAGGGCTGCGATGCATCAATTTTGTTGGATGATAGCAGAACAATAGTCAGCGAAAAAAATTCTGGACCTAACAAAAACTCTGTCCGAGGTTTCGAAGTGATCGATGAAATCAAGTCTAGGTTGGAAGAAGCATGTCCTCAGACTGTGTCCTGTGCAGACATTCTTGCTCTTGCTGCTAGGGGCTCCACTGTTCTTAGTGGAGGACCTAACTGGGAACTCCCATTAGGGAGAAGAGACTCAAAAACAGCAAGCCTAAGCGGGTCAAACAAAAATATTCCTCCACCAAACGCCACCATTGAAACTCTGATAACATTTTTCAAGCGTCAGGGGCTTGATGAAGTAGACCTTGTTGCCCTCTCAGGTGCACATACCATTGGAGTGGCAAGATGTGCCACATTCAAGCAGAGACTATACAACCAAAAGGGAAACAACGAACCAGATGAGAATCTAGAAAAATCCTTTTACTTTGATTTGAAGACAATGTGCCCAAAATCAGGAGGTGACAACTTCATTTCTCCCTTGGACTTTGGCTCCCCAAGAATGTTTGATAATACATATTTCAAACTCATTCTCAGGGGGAAAGGACTTCTTAACTCAGACGAAGTGCTTCTTGTGGGAAATGTTAAGGAAACTCGTAAGCTGGTCAAGAAATATGCAGAAGATGAGAGCCTCTTCTTTGAGCAATTTTCCACCTCCATGATCAAGATGGGCAACCTTCGTCCTCTCACTGGATTCAATGGTCAAGTTAGGAAAAACTGTCGCAGAGTTAATTAA 1032 0.4351 MTFIKLTLLAMIIAFFSVKLSWAHPGFRFGRGGHHGGISFGLSPQFYQFSCPQANDIVMSVLEKAIAKDMRMAASLLRLHFHDCFVQGCDASILLDDSRTIVSEKNSGPNKNSVRGFEVIDEIKSRLEEACPQTVSCADILALAARGSTVLSGGPNWELPLGRRDSKTASLSGSNKNIPPPNATIETLITFFKRQGLDEVDLVALSGAHTIGVARCATFKQRLYNQKGNNEPDENLEKSFYFDLKTMCPKSGGDNFISPLDFGSPRMFDNTYFKLILRGKGLLNSDEVLLVGNVKETRKLVKKYAEDESLFFEQFSTSMIKMGNLRPLTGFNGQVRKNCRRVN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00885 343 CDD secretory_peroxidase 41 342 IPR033905 GO:0004601|GO:0042744
Vian7g00885 343 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Vian7g00885 343 PRINTS Plant peroxidase signature 200 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian7g00885 343 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian7g00885 343 PRINTS Plant peroxidase signature 259 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian7g00885 343 PRINTS Plant peroxidase signature 317 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian7g00885 343 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian7g00885 343 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian7g00885 343 PRINTS Plant peroxidase signature 275 292 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian7g00885 343 PRINTS Plant peroxidase signature 115 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian7g00885 343 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian7g00885 343 FunFam Peroxidase 45 187 - -
Vian7g00885 343 PANTHER PEROXIDASE 72-RELATED 41 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian7g00885 343 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian7g00885 343 PRINTS Haem peroxidase superfamily signature 153 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian7g00885 343 PRINTS Haem peroxidase superfamily signature 135 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian7g00885 343 PRINTS Haem peroxidase superfamily signature 261 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian7g00885 343 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian7g00885 343 ProSiteProfiles Plant heme peroxidase family profile. 41 343 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian7g00885 343 FunFam Peroxidase 179 322 - -
Vian7g00885 343 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
Vian7g00885 343 Gene3D Peroxidase, domain 2 179 323 - -
Vian7g00885 343 SUPERFAMILY Heme-dependent peroxidases 41 343 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian7g00885 343 Gene3D - 46 343 - -
Vian7g00885 343 Pfam Peroxidase 60 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00885 Vian-Chr7 17151561 17152878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00885 1 343 Peroxidase AT1G44970 70.520 4.88e-179 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00885 K00430 - gmx:102660391 625.935