Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00872 ATGGCTGATTTAGGCTCAGCCTCTTCCAGGAGAATGTGGTGTTCCATTCCTGAAAGAATGCAGCTGCATGTGGCCATGCTGGCCTTGCAGTTTGGCTATGCTGGCTTCCATGTCGTCTCAAGAGCTGCCCTTAACATGGGTGTCAGCAAGCTTGTTTTCCCTGTCTATCGTAACATCATTGCCTTGCTTCTACTCCTTCCCTTTGCCTACTTCTTGGAAAAGAAGGAGAGGCCAGCTATCAGTTTAAACTTTGCCTGCCAGTTCTTTTTTCTGGCACTTGTTGGGATTACAGCAAACCAAGGTTTCTACTTGCTTGGGTTGGAGAACACATCTCCTACCTTCGCATCAGCAATACAGAACTCTGTCCCAGCAATTACATTCCTCATGGCAGCCATTTTCAGAATAGAGCAAGTGAGATTGAACAGAAAAGACGGGCTGGCAAAGGTGGTGGGAACCCTTTTGTGTGTAATTGGGGCCACTGTGATCACACTTTACAAAGGTCCAACAATATACAGCCCAGCAACCCGTGTGAACAGCATGAACAGCAACACAATAACAACAGTGTTTGATTTTGGAACACTCTCACTGGGAGATGCAAAGGGAAAGAACTGGACCCTGGGATGTTTGTACCTGATTGGACACTGCTTGTCTTGGTCTGGTTGGCTTGTGCTGCAAGCACCAGTTTTGAAGAAGTACCCGGCTCGTCTCTCTTTCACTTCCTACACCTGTTTCTTTGGCCTCTTGCAGTTCCTGGTCATTGCTTTGGTCCTTGAAAGAGATGCACAGGCTTGGCTTTTCCACTCTGGTGGAGAAGCTTTCACAATTTTATATGCGGGAGTGGTGGCATCAGGAATTGCCTTCGCTGTACAAATATGGTGCATTGAAAGAGGTGGCCCTGTGTTTGTTGCTGTGTATCAACCTGTTCAGACTTTTGTTGTCGCCATCATGGCAACCATAGCTTTAGGAGAAGAGTTCTACTTGGGAGGGATCATTGGGGCAGTGTTGATTGTAGCGGGACTGTACTTTGTTTTGTGGGGTAAAAGTGAAGAGAGGAAATTTGCTAGAGAACAGCTTGCTATTGCATCCACTACTGATCATAGCATCATAAGGCCTGCAAGCCACGCCAAAGCATCACTTGCTCAGCCACTTCTTTCTTCAACAACAGAGAATGTTTGA 1176 0.4668 MADLGSASSRRMWCSIPERMQLHVAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPAISLNFACQFFFLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEQVRLNRKDGLAKVVGTLLCVIGATVITLYKGPTIYSPATRVNSMNSNTITTVFDFGTLSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSFTSYTCFFGLLQFLVIALVLERDAQAWLFHSGGEAFTILYAGVVASGIAFAVQIWCIERGGPVFVAVYQPVQTFVVAIMATIALGEEFYLGGIIGAVLIVAGLYFVLWGKSEERKFAREQLAIASTTDHSIIRPASHAKASLAQPLLSSTTENV 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00872 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Vian7g00872 391 PANTHER WAT1-RELATED PROTEIN 24 356 IPR030184 GO:0016020|GO:0022857
Vian7g00872 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 349 - -
Vian7g00872 391 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020
Vian7g00872 391 Pfam EamA-like transporter family 206 344 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00872 Vian-Chr7 17038061 17041017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00872 1 391 Nodulin-like Gene Family AT1G75500 74.177 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00872 - - gmx:100792395 694.501