Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00869 ATGGCGGGGTTCTTCTCTCTAGGAGGAAGGCATAACAAAGCAGAAGACGAGGAGGATCACAGAGAAGACAACAACATCAACAACAATAATAATAACAGTCAATTTTTGTTCAGAAACGTTAACGACGAGATCTACAACACCAACAAGGGCTTCGAGATATGGCCACAATCCTCGTACCACCACAACTTCACCAACTACTACTCCTTCGGTGTGGGCCCTAGTCGCAGGAACAACACCGCCAACAACAGCTCCTCCAACAACGTAAACGACGACGTTTCTGTCTCTTTCTCGGATGAGTCCAACCGCTTCGGCTTCACCGTCATGAGGTCCGGAGGCGGCGTGGGAGGCGGCGGAGGCGGCGTGGGAGGCGGCGGAGGCGGCGGGATGAACTGTCAGGACTGTGGCAACCAGGCCAAGAAAGACTGTTCGCACCTCAGATGCAGAACCTGCTGCAAGAGTCGAGGGTTTCAGTGCCAGACTCACGTTAAGAGCACTTGGGTTCCCGCCGCCAAACGCCGTGAACGACAGCAACAACTCGCTGTGTTGCAGCAACAAAATCAACCACCACAGTTTCGTGGAGATCACTCCAAACGACACAGGGAAAGTATCGAAGGTGTTGCAGCCGGTGGTTCCCTCGCTTGCGCTCCAGTTCCTATCACCACCACAGGGTTGGAGGTGGGTCAATTTCCACCGGAGCTGAACTCGCCAGCGGTGTTTCGGTGCGTCAAAGTGAGTGCAATGGATGCACCGGACGAGCGTTACGCGTACCAAACCGCAGTGAACATAGGAGGGCACGTGTTCAAGGGAATTCTCTACGATCAAGGAGTGGACGGTCCTTACGCCAGTGCAGGTTGCGAGGGTTCCTCCGGTGGCGGCGGTGAAGCTCGGCCACTCGCTCTCATGGCCGCCACAACCACAACCACAACAGCTGGAAACCCTTTTGACGCTTCACTCTACCCGGCTCCGATGAATGCTTTCATGGCTGGTACGCAATTCTTCCCACCCCCAAGATCCTAA 1017 0.5497 MAGFFSLGGRHNKAEDEEDHREDNNINNNNNNSQFLFRNVNDEIYNTNKGFEIWPQSSYHHNFTNYYSFGVGPSRRNNTANNSSSNNVNDDVSVSFSDESNRFGFTVMRSGGGVGGGGGGVGGGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLAVLQQQNQPPQFRGDHSKRHRESIEGVAAGGSLACAPVPITTTGLEVGQFPPELNSPAVFRCVKVSAMDAPDERYAYQTAVNIGGHVFKGILYDQGVDGPYASAGCEGSSGGGGEARPLALMAATTTTTTAGNPFDASLYPAPMNAFMAGTQFFPPPRS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00869 338 NCBIfam LRP1 C-terminal domain 228 276 IPR006511 -
Vian7g00869 338 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 310 IPR007818 GO:0003700|GO:0006355
Vian7g00869 338 MobiDBLite consensus disorder prediction 1 33 - -
Vian7g00869 338 NCBIfam putative zinc finger domain, LRP1 type 130 172 IPR006510 -
Vian7g00869 338 Pfam Domain of unknown function (DUF702) 128 277 - -
Vian7g00869 338 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00869 Vian-Chr7 16992204 16993667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00869 1 338 C2H2 Transcription Factor Family AT1G75520 44.764 1.61e-85 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Vian7g00869 DUF702 1.4e-64 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00869 - - gmx:100807290 452.21