Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00868 ATGAAGATCCAATGCGACGTCTGTGACAAACACGATGCATCCGTCTTTTGTACCGCCGATGAAGCCGTCCTCTGCGACGGCTGCGACCACCGCATCCACCACGCCAACAAACTAGCCTCCAAACACCAGCGTTTCTCTCTTCTTCGACCCAAACAACACCCTCTATGCGATGTTTGTCAGGAGAGAAGAGCCTTCACGTTCTGTCAGCAAGACAGGGCGATTCTGTGCAGAGAGTGTGACGTGTCGATTCATTCTGCGAATGAACACACCCTTAAGCATGATAGGTTCCTTCTCACTGGTGTTAAACTTTCTGCTTCTTCTTCATCGCAAGAAACCCCTTCTCCTTCAAACTCCGCCCCTGATTCTCCTTTTGACCTTTCGCATCAAAAAACAATACCTTTATCTTCCACCGTCAGTGAGGTTGGTGTTGAAGCGGCGGCATCCACCGGCGCTAGCAGCATATCGGAGTATTTGATAGAGACTCTTCCTGGGTGGCAGGTTGAAGACTTTCTCGATTCATATTCTGTTCCCTTTGGTTTCTGCAAGAGTGATGAATTGTTGCCACGGTTTGATGGTGACATGGAGAGTCATCTGGGTACCTTTTCAACAGAGAACATGGGAATATGGGTTCCTCAAGCGCCACCACCTCTTCTGAGTTCTTCACAGATGAATAGAGCGATTGGTCAAAACGAAAATAACATCAAAGGTAGCAGATCGAGGTTGAAGGATGATAATTTCACTGTGCCACAGATTAGTCCTCAGTCAAATTCCAAGAGAGGAAGGTTTCTGTGGTAG 795 0.4767 MKIQCDVCDKHDASVFCTADEAVLCDGCDHRIHHANKLASKHQRFSLLRPKQHPLCDVCQERRAFTFCQQDRAILCRECDVSIHSANEHTLKHDRFLLTGVKLSASSSSQETPSPSNSAPDSPFDLSHQKTIPLSSTVSEVGVEAAASTGASSISEYLIETLPGWQVEDFLDSYSVPFGFCKSDELLPRFDGDMESHLGTFSTENMGIWVPQAPPPLLSSSQMNRAIGQNENNIKGSRSRLKDDNFTVPQISPQSNSKRGRFLW 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00868 264 ProSiteProfiles Zinc finger B-box type profile. 51 98 IPR000315 GO:0008270
Vian7g00868 264 MobiDBLite consensus disorder prediction 232 264 - -
Vian7g00868 264 CDD Bbox1_BBX-like 5 47 - -
Vian7g00868 264 CDD Bbox1_BBX-like 55 98 - -
Vian7g00868 264 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Vian7g00868 264 FunFam B-box zinc finger protein 21 1 96 - -
Vian7g00868 264 Gene3D Classic Zinc Finger 1 93 - -
Vian7g00868 264 SMART bboxneu5 51 98 IPR000315 GO:0008270
Vian7g00868 264 SMART bboxneu5 4 47 IPR000315 GO:0008270
Vian7g00868 264 MobiDBLite consensus disorder prediction 243 264 - -
Vian7g00868 264 Pfam B-box zinc finger 52 91 IPR000315 GO:0008270
Vian7g00868 264 MobiDBLite consensus disorder prediction 107 129 - -
Vian7g00868 264 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00868 Vian-Chr7 16956138 16957414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00868 1 264 C2C2-CO-like Transcription Factor Family AT1G75540 43.675 7.19e-77 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Vian7g00868 zf-B_box 3.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00868 - - gmx:100807827 417.927