Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00861 ATGGAAGGTGTTGATCAAAGTAATTTGAAACGAAATGGTAGTGGTTTTGGTTCATCATCGGGAGCAAATCTCAGGCCCCCAAATCGATTGAATACTGCTGTGCCTGTTAGTCAATTGGGTGTTGCTGAGAATCAGAAACCCTATGGTATACCACCCTCACACCCTAATACGAATATTTCACCTTCTTCAGCCTATCCTCAGTTTTTTGGCTCCCAATCCCATTCCAATTCGGTTTCTCAGCGTTTGGGTTCTCCCAATTTGAGTTCTGTTTCATCCCATTCTAGGTCTCTGTCTCAGCCCTCTTTTTTCTCTCTGGATTCCTTGCCCCCATTGAGTCCTTCTCCTTATAGGGAGCCATCCGTTTCTGACCCAATTTCATTAGATTTGTCTGCTGAGGAAAGCTTGGTTAACCCACATGCCCCTTTGCCTAATCGTGGTCCTGCACTTCAGCTTGGCCATTCTCTTCCACCTCGGAAAGGACACAGGCGATCCAGCAGTGATTCCCCTTTGGGAATCTCTGATTTTATCCAGTCTGCCCCTCAGTCGGTTCCCTCCAGGACTTGGAGTGATCGTGATGTTTCTAGGGGAGGGAACTTAGGATACGAGAAACCGATTCAGTTGGTGTTAAAGGAACCGATTAAGAGTATGGACCGTGTTGATGGTTTTGGTGGGGAGCCTGTGGTTGGGAGGAAAGAGGATGATTCACTGGATGATTTGTTTAGTGCATATATGAATTTGGACAACATTGATACTCTGAATTTTTCTGGTATGGAAGATAAAGATTTGGATAGCAGAACCAGTGGTTCCAAGACTGTTGAAAGCAGTGATAACGAAGTTGAGAGTCATGCGAATGGGAAAACAACTGGTGCTCGAGGGGCTAGTTCAAGCTGTTCTGAGGACAGAAGGGAAGGAGTTAAGAGGAGTTCTAATGGGGACATTGCACCGGGATCCCGGCACCGGAGAAGTTACTCGTTGGACAGCTCCATTGGAAATTTTCATATTGGAGATGAATCACCTAAGCTTCCTCCTCTGCAAAACCGGGGTGGTCAACACTCGCCTAGCAATTCACTAGAGGGTAAGACATCTGAAACAAGCATAGAGTTTGGAAATGGTGAATTCAGCTCGGAGGAGCTAAAGAAAATAAAGGAGAATGATAAACTTGCTGAAATTGCCATGGCTGATCCTAAACGTGCAAAAAGGATTTTGGCCAATAGGCTATCTGCTGCTCGCTCGAAAGAGCGGAAGATGCGATACATTTCTGAATTGGAGCTGAAAGTCCAAACACTTCAGACAGAGACAACCACATTGTCTACTCAATTTACCAAATTACAGATGGACAATTCAGAGCTTAAAAGTGAGAACAATGAGTACAAATTGAGGATTCAAGCCTTGGAACAGCAGTCCCAACTGAAAGATGCTCTGAATGAGACTTTGGATGCCGAAGTGCGGCGGTTGAGGCGCACGGTCGCAGACCTTGGCGGTGAGTCCCTCCTCTCGAGTCGAATGGCTCAACAGCTTGCTATTAGCCAACAAATGTTCCCGTTACAGCACCAGCAGCACCCTAACCAGCTTAGACATGGTCAACTGCACAACAGCCATTCCCAGGAACAAACACAGACTCAGTCACAGCGCCAGAATGGCAAAGCAACAGCCTACTGA 1659 0.4635 MEGVDQSNLKRNGSGFGSSSGANLRPPNRLNTAVPVSQLGVAENQKPYGIPPSHPNTNISPSSAYPQFFGSQSHSNSVSQRLGSPNLSSVSSHSRSLSQPSFFSLDSLPPLSPSPYREPSVSDPISLDLSAEESLVNPHAPLPNRGPALQLGHSLPPRKGHRRSSSDSPLGISDFIQSAPQSVPSRTWSDRDVSRGGNLGYEKPIQLVLKEPIKSMDRVDGFGGEPVVGRKEDDSLDDLFSAYMNLDNIDTLNFSGMEDKDLDSRTSGSKTVESSDNEVESHANGKTTGARGASSSCSEDRREGVKRSSNGDIAPGSRHRRSYSLDSSIGNFHIGDESPKLPPLQNRGGQHSPSNSLEGKTSETSIEFGNGEFSSEELKKIKENDKLAEIAMADPKRAKRILANRLSAARSKERKMRYISELELKVQTLQTETTTLSTQFTKLQMDNSELKSENNEYKLRIQALEQQSQLKDALNETLDAEVRRLRRTVADLGGESLLSSRMAQQLAISQQMFPLQHQQHPNQLRHGQLHNSHSQEQTQTQSQRQNGKATAY 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00861 552 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 394 457 IPR004827 GO:0003700|GO:0006355
Vian7g00861 552 Coils Coil 440 495 - -
Vian7g00861 552 SUPERFAMILY Leucine zipper domain 396 451 IPR046347 GO:0003700|GO:0006355
Vian7g00861 552 CDD bZIP_plant_RF2 397 469 IPR044759 GO:0003700|GO:0006355
Vian7g00861 552 MobiDBLite consensus disorder prediction 166 192 - -
Vian7g00861 552 MobiDBLite consensus disorder prediction 50 108 - -
Vian7g00861 552 MobiDBLite consensus disorder prediction 1 199 - -
Vian7g00861 552 MobiDBLite consensus disorder prediction 1 39 - -
Vian7g00861 552 FunFam Transcription factor VIP1 isoform A 394 456 - -
Vian7g00861 552 MobiDBLite consensus disorder prediction 281 295 - -
Vian7g00861 552 Gene3D - 395 460 - -
Vian7g00861 552 SMART brlzneu 392 456 IPR004827 GO:0003700|GO:0006355
Vian7g00861 552 MobiDBLite consensus disorder prediction 345 371 - -
Vian7g00861 552 MobiDBLite consensus disorder prediction 253 371 - -
Vian7g00861 552 Pfam bZIP transcription factor 396 454 IPR004827 GO:0003700|GO:0006355
Vian7g00861 552 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 92 545 - -
Vian7g00861 552 Coils Coil 412 432 - -
Vian7g00861 552 MobiDBLite consensus disorder prediction 515 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00861 Vian-Chr7 16894478 16897199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00861 27 509 bZIP Transcription Factor Family AT4G38900 46.019 4.47e-104 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian7g00861 bZIP_1 1.9e-10 CL0018