Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00855 ATGTTGGAACAATTTGAGAGGAAAAGGAACTCGCCGAAGAAACAGAAAGGAATAAATGAAGATGTGACCAAGAAGAACAACAACAGAGGAAAACATAGGAGAAAAATGTCCCCAAAATGCAGCCAAATCCGACACATCGTTCGGCTCCGCCAGATGCTGCGGCGCTGGCGCAACAAGGCTCGCATGTCTGCAAACCGCACACCGTCAGATGTGCCTGCAGGACACGTGGCTGTTTGTGTAGGCACCAACCTCACCAGATTCGTGGTGCGTGCAACTTACCTGAACCACCCCGTCTTCAAGAAGCTTCTCCTTCAAGCTGAAGAAGAGTATGGCTTCTCCAACCACGGTCCATTGGTCATCCCCTGCGACGAAATGCTCTTCCACGAGGTTCTCCGGTTCATCTCTTGGTCCGAATCAGCAAAACCAAACCGGTTTGTAAACCTCGAACTTGACGACTTAAAACAACACTGCCACATCAGAATCAACAACAACCTTGATTTTTGGCCAGAGTCTAGACCGCTCCTTCACGGTCCCAGTGACAAAACCGTTTGGTAA 555 0.4937 MLEQFERKRNSPKKQKGINEDVTKKNNNRGKHRRKMSPKCSQIRHIVRLRQMLRRWRNKARMSANRTPSDVPAGHVAVCVGTNLTRFVVRATYLNHPVFKKLLLQAEEEYGFSNHGPLVIPCDEMLFHEVLRFISWSESAKPNRFVNLELDDLKQHCHIRINNNLDFWPESRPLLHGPSDKTVW 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00855 184 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 54 130 IPR003676 GO:0009733
Vian7g00855 184 Pfam Auxin responsive protein 48 133 IPR003676 GO:0009733
Vian7g00855 184 MobiDBLite consensus disorder prediction 1 27 - -
Vian7g00855 184 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00855 Vian-Chr7 16811179 16822125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00855 39 183 Calmodulin-binding Proteins AT4G34750 49.007 8.93e-42 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00855 K14488 - gmx:100782525 271.937