Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00852 ATGGAACTTCCAGATTGTGTATATCCTAGGCCACCAGTTACCATATTCCCATGTGCTCCAACACCAAAGCATTCTCTCCATCTATCCAATCTCGACAGCCAAAAGTTCTTCAAATTCTCCGTTAAGTATGTGCACCTCTTCGAGAAATGTGTGAGCGTGGATGTGTTGAAGTCTTCTCTGGCAAGAGTTTTGGTGGATTACTACCCCTTAGCTGGGAGATTGAGGAGGAGCAGCATTTGTGAGGATGATCACAAGCTTGAGGTGGATTGCAATGGAGAAGGTGTTGTGTTTGCTCAGGCTTTCATGGATGCCACTGCTCAACAATTACTTCAACCTTGCAACCTGCCAAACACTTCATGGAAGAAGCTCCTTTGCAAAGTCAAAGCTCAAAGTTTCTTAGATCTTCCTCCTCTTATAATCCAGGTGACAAGTCTTCGATGCGGAGGGATGATACTGTGCACGGCGATCAACCACTGTCTTTGCGACGGCACCGGCGCATCCCAATTCCTACACGATTGGGCCTGTCTCACTAGAGATCCCAACACTGAATTACCAGTCACACCCTTCCACGGGCGACACGTGTTGAATCCTCGAGACCCTCCCCAGGTGCACTTCACCCACGCGGGATACACCAGAACAAACCCTGCGTCTCATCAAGTGGACCTGCACGATTGGATGGTGCACTCGCAGCCGCTGGTCGTCACGTCATTCACATTCGGAACCTCCGAGGTGCTTCTGTTGAAGAAACAGTGTTTGTCGTGGCCGAAGCCCATCACCACCTTCGAAAGCGTGGCGGCACACACGTGGCGTGCGTGGGTTAAATCAATGAATCTCTCCCCCACGATAACAGTTAAACTCATTTTCACCGTTAACGTTAGGAAAAAGGTTAACCTCCCAGAAGGGTATTATGGGAACGGGTTTGTTCTGGCATGCGCAGAGAGCACAGTGAGAGATTTAACAACAGTTGAAAATGATGATGGCGATGATATCAGTCACGGTTTGAAAGCGTTGCAACAAGCTAAGGCTATTTTGGAGGAGAAAGGGTATATAAGGTCGATGGTTGATTTGTTGGAGGACAAAACGGTGCGTGTTGATCTTTCGACGAGTTTGGTTATATCGCAATGGTCAAGACTAGGGTTGGAGGACGTGGATTTCGGATTAGGAAAACCCTTGTTTATGGGTCCTTTATCAAGCTATGTTCATTGTTTGTTTTTACCGGTGGTTGGAGATTCTAATGCAGTCAGAGTGCTCGTGTCTGTTCCTGAAAGTGTTGTGGGAAGTTTTCGTTACCACATGCTCGTGAAAGACGGTTGGAAAAAACAAGAGAATGATGGTTAG 1338 0.4746 MELPDCVYPRPPVTIFPCAPTPKHSLHLSNLDSQKFFKFSVKYVHLFEKCVSVDVLKSSLARVLVDYYPLAGRLRRSSICEDDHKLEVDCNGEGVVFAQAFMDATAQQLLQPCNLPNTSWKKLLCKVKAQSFLDLPPLIIQVTSLRCGGMILCTAINHCLCDGTGASQFLHDWACLTRDPNTELPVTPFHGRHVLNPRDPPQVHFTHAGYTRTNPASHQVDLHDWMVHSQPLVVTSFTFGTSEVLLLKKQCLSWPKPITTFESVAAHTWRAWVKSMNLSPTITVKLIFTVNVRKKVNLPEGYYGNGFVLACAESTVRDLTTVENDDGDDISHGLKALQQAKAILEEKGYIRSMVDLLEDKTVRVDLSTSLVISQWSRLGLEDVDFGLGKPLFMGPLSSYVHCLFLPVVGDSNAVRVLVSVPESVVGSFRYHMLVKDGWKKQENDG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00852 445 Gene3D - 226 433 IPR023213 -
Vian7g00852 445 Gene3D - 10 212 IPR023213 -
Vian7g00852 445 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 16 422 - -
Vian7g00852 445 Pfam Transferase family 14 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00852 Vian-Chr7 16752079 16753552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00852 10 395 Monolignol Biosynthesis Gene Families AT5G48930 28.431 5.80e-41 149