Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00838 ATGATGAGGTTACCGGAATCAAGCAATGAAGAACAAACCTTGTTTTTGGTTCGATGGGTGAATGATCACATACAAGATGCACAGATTATTATTGAGAAACCAGTTCTGTTTGCTGAGTTTGGAGTGTCAGTGAGAAACATGAGCACAAGTGATGGTGGTGCAGCAACTGGTGGCTTGTTTTGGCATCTTTTAGCAGAAGGAATGGATTCTTTTAAAGATGGCTATGAAGTGCTCTTAGATGAGAATAGCTCAACTGCTACTTTGATTGCTCAAGAGTCTCAAAAGCTAAACAGAATCAGGATGAAGAAATTCTCCATTGATAACACTAAAGTAAAGCAAGTTAGAAACTGA 351 0.3875 MMRLPESSNEEQTLFLVRWVNDHIQDAQIIIEKPVLFAEFGVSVRNMSTSDGGAATGGLFWHLLAEGMDSFKDGYEVLLDENSSTATLIAQESQKLNRIRMKKFSIDNTKVKQVRN 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00838 116 PANTHER - 5 104 IPR045053 GO:0004553
Vian7g00838 116 SUPERFAMILY (Trans)glycosidases 15 88 IPR017853 -
Vian7g00838 116 Gene3D Glycosidases 3 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00838 Vian-Chr7 16644520 16647063 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00838 4 100 Glycoside Hydrolase AT5G66460 39.316 3.69e-21 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00838 K19355 - gmx:100817974 149.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00838 7 16644520 16647063 Vian7g00838 7 16644520 16647063 ECH
Vian7g00838 7 16644520 16647063 Vian4g02332 4 40065521 40068109 PCT