Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00814 ATGTTTCATCGTTGGAGCAGTTCCCCTCAGCAAGACCAAGAAAGCAGCGAGCTTCATGCTGAATCAAAGAAGTTTAGGTTGGTTGAATCTCGTGTTCCAGAGGTTCATACACGAAGAGACTTTAGGGATCACAGACAACCCTGTGTTTCTGGTGTTTTGTTGAGTAAGAATGTTGTTGCTGATTATGCATGTTCAAAATTCTGCAAGCAGATCAAGGAGCTGAAGGGTGCAATTGGACCCTTATCAGGTCACGGTTTGGTATATTGCACTGATGCATGTTTGAAGAGATATTTGGAAGCTCGAAACTGGAATGTAGACAAGTCCAAGAAGATGTTGGGGGAGACTCTGAAGTGGAGATCAACATATAAACCAGAGGAAATTCGCTGGCAAGAGGTTGCAATGGAAGGGGAGACTGGGAAATTGTATAGAGCAAGCTTTCGTGATAGACAAGGAAGAACTGTTCTTATTCTGAGACCAGGAATGCAGAACACTACTTCAATGGAGAATCAGATGCGGCATTTTGTGTATATGTTGGAAAACGCCTTGCTTGACCTTCCACCGGGTCAAGAACAAATGGCATGGTTGATAGACTTCACTGGGTGGTCAATAACCAACAATGTGCCCTTGAAATCAGCCAGAGAGACCATCAACATTTTGCAGAATCATTACCCTGAGAGACTTGCCATAGCATTTCTTTACAACCCCCCTCGAGTTTTTGAAGCCTTTTGGAAGATAGTTAAGTACTTCTTGGATAGCAAGACATTTCAGAAGGTGAAGTTTGTGTACCCAAAGAACAAAGATAGTGTGGAGCTCATGAAGTCCTACTTTGATGAGGAAAACCTTCCCAAAGAACTAGGTGGAAAAAGCACAATGCGTTATAACCACGAGGAGTTCTCCAGATTAATGGTTCAGGATGACTTGAAATGTGCAGCATTTTGGGGGCCTGATGAGAAGCTCTCAAACCACATTGCTAATGGGCATTCTGCTGCAGTTTTTAATGAAACTTCACCTGACGTATGTTAA 1023 0.4291 MFHRWSSSPQQDQESSELHAESKKFRLVESRVPEVHTRRDFRDHRQPCVSGVLLSKNVVADYACSKFCKQIKELKGAIGPLSGHGLVYCTDACLKRYLEARNWNVDKSKKMLGETLKWRSTYKPEEIRWQEVAMEGETGKLYRASFRDRQGRTVLILRPGMQNTTSMENQMRHFVYMLENALLDLPPGQEQMAWLIDFTGWSITNNVPLKSARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDSKTFQKVKFVYPKNKDSVELMKSYFDEENLPKELGGKSTMRYNHEEFSRLMVQDDLKCAAFWGPDEKLSNHIANGHSAAVFNETSPDVC 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00814 340 Pfam CRAL/TRIO domain 147 287 IPR001251 -
Vian7g00814 340 SMART sec14_4 135 290 IPR001251 -
Vian7g00814 340 MobiDBLite consensus disorder prediction 1 15 - -
Vian7g00814 340 MobiDBLite consensus disorder prediction 1 22 - -
Vian7g00814 340 Gene3D - 42 313 IPR036865 -
Vian7g00814 340 PANTHER GH16843P 40 319 - -
Vian7g00814 340 SUPERFAMILY CRAL/TRIO N-terminal domain 68 131 IPR036273 -
Vian7g00814 340 FunFam Phosphatidylinositol transfer protein 3 55 322 - -
Vian7g00814 340 CDD SEC14 147 288 IPR001251 -
Vian7g00814 340 Pfam CRAL/TRIO, N-terminal domain 90 112 IPR011074 -
Vian7g00814 340 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 129 293 IPR001251 -
Vian7g00814 340 SUPERFAMILY CRAL/TRIO domain 129 304 IPR036865 -
Vian7g00814 340 SMART CRAL_TRIO_N_2 90 115 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00814 Vian-Chr7 16449467 16451193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00814 94 282 Acyl Lipid Metabolism Gene Families AT1G55840 27.962 1.46e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00814 K26544 - gmx:100790867 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00814 7 16449467 16451193 Vian7g00814 7 16449467 16451193 ECH