Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00792 ATGTTTTTCTCTATGAAAGTGATGGGCCTCAATCCAAACTCAAAACCCTTTGCATTTGCACACTTCCTCCTCTTCTTATTAGGTAATGTAGCATCTGCCGCAGTGTTCACCCTCCAAAACCGTTGCAGTTACACAGTTTGGCCGGGGACACTTTCCGGCAACGGTGTCGCCACTCTCGGCGACGGCGGTTTCCCCCTGGAGCCGGGTGCGGAGATTCAGTTCACCGCACCATCTGGCTGGTCCGGCCGGTTATGGGCCAGGACCGGCTGTAGCTTCGACGGATCCGGCATCGGAACATGCGTCACCGGAGACTGCGGCAATGGACTGCGGTGCAGCGGGGGAGGCGTTCCACCGGCCACTCTGGCAGAGTTCACCATCGGATTCGCCGGTAACGGCGACAAGGACTTCTACGACGTGAGTCTTGTGGACGGTTACAATGTAGGCATCGGCGTGCTGGCTACCGGAGGAACCGGTGACTGCAAGTACGCAGGGTGCGCGGCGGACTTGAACACAGTGTGTCCGGAGGAATTGCAAGTGAGAGACGGCGGCGGCACGGTGGTTGCGTGCAAAAGTGCGTGCGCCGCGTTTAACACGTCGGTGTTTTGCTGCACCGGCGAGCACGGAACGCCGCAAACGTGTTCGGCGACACATTATTCGGAGATTTTCAAGAATGCGTGTCCAACAGCGTACAGTTACGCTTACGATGACGCTTCCAGCACTCGCACCTGTTCTGGATCTGATTATGTAATCGCCTTTTGCCCTTAA 765 0.5699 MFFSMKVMGLNPNSKPFAFAHFLLFLLGNVASAAVFTLQNRCSYTVWPGTLSGNGVATLGDGGFPLEPGAEIQFTAPSGWSGRLWARTGCSFDGSGIGTCVTGDCGNGLRCSGGGVPPATLAEFTIGFAGNGDKDFYDVSLVDGYNVGIGVLATGGTGDCKYAGCAADLNTVCPEELQVRDGGGTVVACKSACAAFNTSVFCCTGEHGTPQTCSATHYSEIFKNACPTAYSYAYDDASSTRTCSGSDYVIAFCP 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00792 254 CDD TLP-PA 35 253 - -
Vian7g00792 254 ProSiteProfiles Thaumatin family profile. 33 254 IPR001938 -
Vian7g00792 254 ProSitePatterns Thaumatin family signature. 96 111 IPR017949 -
Vian7g00792 254 Gene3D Thaumatin 34 254 IPR037176 -
Vian7g00792 254 PIRSF PR5 3 254 IPR001938 -
Vian7g00792 254 Pfam Thaumatin family 40 254 IPR001938 -
Vian7g00792 254 PANTHER OS03G0233200 PROTEIN 23 254 IPR001938 -
Vian7g00792 254 SMART tha2 36 254 IPR001938 -
Vian7g00792 254 SUPERFAMILY Osmotin, thaumatin-like protein 34 254 IPR037176 -
Vian7g00792 254 PRINTS Pathogenesis-related protein signature 35 47 IPR001938 -
Vian7g00792 254 PRINTS Pathogenesis-related protein signature 83 94 IPR001938 -
Vian7g00792 254 PRINTS Pathogenesis-related protein signature 96 125 IPR001938 -
Vian7g00792 254 PRINTS Pathogenesis-related protein signature 244 253 IPR001938 -
Vian7g00792 254 FunFam Thaumatin-like protein 1a 34 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00792 Vian-Chr7 16206599 16207579 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00792 19 254 Receptor kinase-like Gene Family AT5G38280 44.758 5.03e-59 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00792 - - vum:124831188 520.39