Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00784 ATGGCGGTTTCCCTTTCGGCACTCAGCACCTCCCTCTCTTCACTTTCTTTCTCTTCCCACATTTCTCAGAGACCCAACACTCTCTCCTTCGCCACAACGCTCTCCCTCTCGCGCTTCCCCAAAATCCCTTCCCTCGTCGTCTCCGCCACTGCGCTCGCCGAACCGGAAACCGAAGACCTCAAGAAGTTCGTCAAATCGAGGCTTCCTGGTGGCTTCGCCGCCCAGACCATCATAGGCACCGGTCGCCGTAAGAGCGCCATCGCTCGCGTCGTTCTCCAGGAAGGAACCGGCAAATTCATCATCAATTACCGCGACGCTAAGCCGATTCAGAATATTCTGATTCATAAACTCTCTGGTATCTGGTGTTGTATTGGAAGTTCTTTGACTTCCTGTGATTTCTGTTCTTGCTCGTCAGTGGCTATCTTCCTTTCTTCCATGGATGACTGCTCCAATTCATTCTTTCTTTACACTATGGATAACCCATTTGAGAAAGCAGATAGTTTTGCGGATGGCACACAGTCAACGGAGGAGATGGTTCTGGTGCTTTGCTGCTTCTGGAATGACAGAGAATATCTTCAAGGAAACCCATTGTGGCTTCAATACATTAAGGTCCCTTTGATAACTTTGGGATATGAAAGTAGTTATGATGTTTTTGTCAAAGCTGAGGGTGGTGGCTTGTCTGGTCAGGCACAGGCAATTTCTCTTGGCATTGCCCGTGCCTTGCTGAAGGTGAGCGAAGATCATAGATCACCATTGAGACAGGAAGGACTTCTTACCAGAGATTCCAGAGTGGTTGAGAGGAAGAAAGTTGGTTTGAAGAAAGCTCGTAAAGCCCCTCAATATTCCAAACGTTGA 855 0.4842 MAVSLSALSTSLSSLSFSSHISQRPNTLSFATTLSLSRFPKIPSLVVSATALAEPETEDLKKFVKSRLPGGFAAQTIIGTGRRKSAIARVVLQEGTGKFIINYRDAKPIQNILIHKLSGIWCCIGSSLTSCDFCSCSSVAIFLSSMDDCSNSFFLYTMDNPFEKADSFADGTQSTEEMVLVLCCFWNDREYLQGNPLWLQYIKVPLITLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRSPLRQEGLLTRDSRVVERKKVGLKKARKAPQYSKR 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00784 284 PANTHER RIBOSOMAL PROTEIN S9 61 114 IPR000754 GO:0003735|GO:0005840|GO:0006412
Vian7g00784 284 Pfam Ribosomal protein S9/S16 190 284 IPR000754 GO:0003735|GO:0005840|GO:0006412
Vian7g00784 284 ProSitePatterns Ribosomal protein S9 signature. 223 241 IPR020574 GO:0003735|GO:0005840|GO:0006412
Vian7g00784 284 Hamap 30S ribosomal protein S9 [rpsI]. 72 284 IPR023035 -
Vian7g00784 284 SUPERFAMILY Ribosomal protein S5 domain 2-like 190 284 IPR020568 -
Vian7g00784 284 Gene3D - 68 119 IPR014721 -
Vian7g00784 284 Gene3D - 182 284 IPR014721 -
Vian7g00784 284 SUPERFAMILY Ribosomal protein S5 domain 2-like 77 115 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00784 Vian-Chr7 16119246 16122145 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00784 K02996 - gmx:100811697 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00784 7 16119246 16122145 Vian7g00784 7 16119246 16122145 ECH