Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00777 ATGCTAAGAGAGGAAACGGTGGGTTCCAGAAGTGCCAGGCACACCGCCGCCTCCGCCACCGTCTCCAACAAGGTTCTCGTCGCCGTCAAGGCGGAGAAGGTGATCTCCAACACCGCATTAGCCTGGGCTCTCACTCATGTCGTTCACTCCAGCGACTCCATCACGCTCCTTGCCGTTTACTCTGCTCAAAAAACCGGCAGAAGATTCTGGCATTTTTCGAGAATTGCTGGAGACTGTACGACCGGACCGGCGGCGAAGTTGCCGGAGCGAATTTCAGATATCTCCGAGTCTTGTGCGCAGATGGTGCTTCAGTTGCACAATCAAGTTGAGGTATGCACTCGAGTAAACAGAAAACCTGTACCTGCTGTCACTGGTATCGCTTCCACCACCTTTCTCTCTCAAGTTGTTGCCTCGGCCCTTAACGTAAGGGTAAAGATTAAGGTGGTCACGGGTACTCCCAGTGGTGCTGTGGCGGCCGAGGCCAGATGGAGCGGTTCCCATTGGGTCATACTGGACAAGAAATTAAAGCAAGAGGTAAATCATTGCATGGATGAACTCAACTGTAGCATTGTGGTGATGAATGGGTCACAGGCAAAAATCCTCAGACTTAACTTAGGGTGTTCCGATGAACTCCAAACCCCTTTTTTCTCGGCTACTTCTTCACCAGGCATAGAAATTGCAAAGCTAAAAGGCGGAAGATTGATGCATTCTACCCCAGTGGGTAGCCCTGAAGAAGCAGGTACTTCTGTTATAAGAAATATAGGAGTAAATTCAGGGTCAAGTTCGGACTCGATGACTTCTCCTTTCCTTGTCTATGAACAAAACCCTCTGTACGAGGGTCAGGGCCCAGGAAAAAACATACACAAAGCAATCAACGAACAGATAGATTTCAATGTCCAGCCACCATTATACTTTGACATTGAAAGAGATCGCCCTCCCCCGCTATGGCCGCGTCCAACAGCATCCGTGGCTAGTGAAAACAAGACTGTATTTTGGATTCCTCAAAACCACATTGTAGACGAGAAGTTTCAGAAAACTAAAAACAACAGTACTATCCAAAGAACTAAATCTCCATCTTCGAAAACTTTACTTGAGAATTTTAAGCGTTGTGATCAAGAGATGAGAAGAAATGAATACGGGTTTGACCAAGCTCAAAGTAGAAGATACGACACGGGCAACAGAGATAATTCCATACCTTTGGGCAGAACTACCTCAATACCTCCTCCCTTGTGCTCACAGTGTCAGAATAAAGCACCAGTATTTGGAAAGCCTCCAAAACGGTTTTCTTACAAAGAGCTAGAGGAAGCTACTGATATGTTCTCAGATGTGAATTTTTTGGCTGAAGGTGGATTCGGTGTGGTCCACAAGGGAATCCTCAAAGATGGTCAGGTTGTTGCGGTGAAACAGTTAAAGTGTGGGGGTTCTCAAGCAGATATTGACTTCTGCAGGGAAGTTCGGGTTTTGAGCTGTGCACAACACAGAAATGTTGTGCTGTTGATAGGGTTTTGTACAGAGAGCAATTTGAGGATATTAGTTTATGAGTACATATGCAACGGATCCTTAGACCTCTACTTATATGGAGATGAGAGTATGCCTCTCGATTGGAACTCACGCTTAAAGATTGCAATTGGAACTGCACGAGGCTTGCGCTACCTTCATGAAGACTGTAGAGTTGGTTGTATAGTGCACAGAGACTTTCGACCCAAAAATATCCTCTTAACCCATGACTTTGAACCTCTGGTGGCGGATTTTGGGCTTGCTAGATGGTACTCAGAATGGAATATAGATACAGAAGATCGAGTTCTAGGAACTTCAGGGTATCTTGCACCGGAGTATCTTGACGCCGGAAATCTTACATATAAAGTAGATGTATATGCATTTGGAATTGTATTACTAGAGTTAATAACAGGTAGAAGAATTAGCGAGTTGGAACAGTTCAACGGATTCTCGTATCTTCCTGAATGGATTCACCCTCTACGCATGTTAGAGCCCAGTCATATCTTACAAAACGTCAGTTCTCCCAAACCATTGGAATTTAATCTTCAATGGCAAGCTATGGCTCGAGCTGCTTCGTTGTGTCTCCGTGTGGATCCCGATGCCAGACCCCCAATGTCAAAGATCCTGAGAGTGCTGGAAGGGGGTGATCCAGTTCGTCCTATGGGTTTAGACATAAACTCAATTGGTAACACAAGTGGGCATTTAAGCGGTTTGAAGTCGCTCACTCCACCAGAAGCTACGATAACTCATTCTCGTACACTATCACATTGA 2268 0.4559 MLREETVGSRSARHTAASATVSNKVLVAVKAEKVISNTALAWALTHVVHSSDSITLLAVYSAQKTGRRFWHFSRIAGDCTTGPAAKLPERISDISESCAQMVLQLHNQVEVCTRVNRKPVPAVTGIASTTFLSQVVASALNVRVKIKVVTGTPSGAVAAEARWSGSHWVILDKKLKQEVNHCMDELNCSIVVMNGSQAKILRLNLGCSDELQTPFFSATSSPGIEIAKLKGGRLMHSTPVGSPEEAGTSVIRNIGVNSGSSSDSMTSPFLVYEQNPLYEGQGPGKNIHKAINEQIDFNVQPPLYFDIERDRPPPLWPRPTASVASENKTVFWIPQNHIVDEKFQKTKNNSTIQRTKSPSSKTLLENFKRCDQEMRRNEYGFDQAQSRRYDTGNRDNSIPLGRTTSIPPPLCSQCQNKAPVFGKPPKRFSYKELEEATDMFSDVNFLAEGGFGVVHKGILKDGQVVAVKQLKCGGSQADIDFCREVRVLSCAQHRNVVLLIGFCTESNLRILVYEYICNGSLDLYLYGDESMPLDWNSRLKIAIGTARGLRYLHEDCRVGCIVHRDFRPKNILLTHDFEPLVADFGLARWYSEWNIDTEDRVLGTSGYLAPEYLDAGNLTYKVDVYAFGIVLLELITGRRISELEQFNGFSYLPEWIHPLRMLEPSHILQNVSSPKPLEFNLQWQAMARAASLCLRVDPDARPPMSKILRVLEGGDPVRPMGLDINSIGNTSGHLSGLKSLTPPEATITHSRTLSH 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00777 755 Pfam Protein tyrosine and serine/threonine kinase 446 710 IPR001245 GO:0004672|GO:0006468
Vian7g00777 755 Gene3D Phosphorylase Kinase; domain 1 409 515 - -
Vian7g00777 755 FunFam Os07g0541700 protein 516 604 - -
Vian7g00777 755 SUPERFAMILY Protein kinase-like (PK-like) 420 711 IPR011009 -
Vian7g00777 755 PANTHER OS01G0750732 PROTEIN 188 713 - -
Vian7g00777 755 MobiDBLite consensus disorder prediction 734 755 - -
Vian7g00777 755 ProSiteProfiles Protein kinase domain profile. 440 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00777 755 Gene3D Transferase(Phosphotransferase) domain 1 516 716 - -
Vian7g00777 755 ProSitePatterns Tyrosine protein kinases specific active-site signature. 561 573 IPR008266 GO:0004672|GO:0006468
Vian7g00777 755 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 412 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00777 Vian-Chr7 16041942 16048032 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00777 415 707 Trihelix Transcription Factor Family AT1G68690 46.512 7.38e-74 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Vian7g00777 PK_Tyr_Ser-Thr 4.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00777 - - var:108323674 1447.95