Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00739 ATGGAGATGGAGAGGTACACCAGTCAGCGGTGGAGACCTACTGACGATCAGGTCAAGATGATGACCAGAATCTACAACTTTGGGGTCACACACCCAAGCAGAGCGCAAGTTGTCGAGATCGCGTCTCGACTAAGGACCTTCGCAGATGCCAGCGAATACAACGTGCACTGCTGGTTCAACAATCACGGCAATCGGGTCAGGCGCTGGCAAGCGGAGATAGACCCCACTGGCACTCAGTTTTCACAACTGCCGTTATACATGTATGAATACGACTGGGTGATCATGAGGGCGCCGAGGCTGCTGGACTTGTTCCCCGTTCCGATCATCATTGACGACGACAGGGACACACGACAAATCCCTCCACCCATGCTTCTCACATTCCGGACCCGAGCTCCCTCGACGGAGCTCTCCCTCAGACCACCGCAACCAGCTCGGGAATTTTTTCGCTGA 450 0.5489 MEMERYTSQRWRPTDDQVKMMTRIYNFGVTHPSRAQVVEIASRLRTFADASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYEYDWVIMRAPRLLDLFPVPIIIDDDRDTRQIPPPMLLTFRTRAPSTELSLRPPQPAREFFR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00739 149 Pfam Homeodomain 8 68 IPR001356 GO:0003677
Vian7g00739 149 Gene3D - 8 73 - -
Vian7g00739 149 SUPERFAMILY Homeodomain-like 9 70 IPR009057 -
Vian7g00739 149 PANTHER WUSCHEL-RELATED HOMEOBOX 13 7 72 IPR044559 GO:0003700
Vian7g00739 149 ProSiteProfiles 'Homeobox' domain profile. 4 69 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00739 Vian-Chr7 15645368 15645918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00739 7 72 Wox Gene Family AT5G59340 37.879 7.24e-11 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vian7g00739 Homeodomain 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00739 - K09593 vum:124821070 285.419