Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00712 ATGGAAGACCGAGCGCAAGATGCACTATTCCCTGGTTGCCGGTTCTACCCGTCCGAAGAGGTTCTACTCGGCTACTACTTAACCAAGAAGAACGAGAACCGGGAGCAGAGGTTCAACGGTTCTGATTTGATCAAGGAACTGAACCTGTACGATCATGACCCCTTCGAATTACCGGACGCTGCGTGCTTCCCGTACGGTTACCGAGGGAGGAAGAAGCATTGGTTCTGTTACACCGTTAAAGAGACCAAAAGCCCAAGCAGAAAGGTCAAAAGCGGGTTCTGGCTCCGGAAGGGAAGGGTTCGAGATATTCGCGATAACGGTGGGATTGGGAACGCTGTTTTAGGCACCAGGTCCCGTTTCGTTTTCTACGTCGGGAATTCGCTGAAAAAAGCTACCAGAACGGATTGGATTTTGTACGAGTACGCATTGGTTGACCAAATTCTGTCTTCGTTTGTGCTTTGTCGTGTGGTTAATAAGCCTCATCATAAGAATAGTCCATCTGAAATTGGTCGCAGTTGTTGTGCTGAAGAGAGTGCAGCTGTGGTGGTGCGACACATCGGTGTTCAACATGATGGATGTGTTGGAGGTGATGACGTTTGTGATAATGGATATGTTAATAGAGAGATTGAGGCCGCTGAGAATCCAATTAGGCGTGGTGGTGAACATGATCATGCAGCAACTGTTTCAGTTGCTCAGGGAAGTCAGCCGGTTCAGGAAAGGCTTTCTGGACTTCCCTGTGACGGTGCATTGTACATTGAAGCTGTGATACCTCAGCAACACATGCTTTCCATTCTAGAGGAGGATTTCATAGAATTGAATGATATTGTATGA 831 0.4765 MEDRAQDALFPGCRFYPSEEVLLGYYLTKKNENREQRFNGSDLIKELNLYDHDPFELPDAACFPYGYRGRKKHWFCYTVKETKSPSRKVKSGFWLRKGRVRDIRDNGGIGNAVLGTRSRFVFYVGNSLKKATRTDWILYEYALVDQILSSFVLCRVVNKPHHKNSPSEIGRSCCAEESAAVVVRHIGVQHDGCVGGDDVCDNGYVNREIEAAENPIRRGGEHDHAATVSVAQGSQPVQERLSGLPCDGALYIEAVIPQQHMLSILEEDFIELNDIV 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00712 276 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Vian7g00712 276 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 10 168 - -
Vian7g00712 276 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Vian7g00712 276 Gene3D NAC domain 18 164 IPR036093 GO:0003677|GO:0006355
Vian7g00712 276 Pfam No apical meristem (NAM) protein 11 143 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00712 Vian-Chr7 15343232 15346277 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00712 9 186 NAC Transcription Factor Family AT1G32510 31.959 3.13e-22 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vian7g00712 NAM 7.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00712 - - gmx:100790503 384.415