Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00707 ATGTTAGTCATGGAAGATAGGGATCACTGTTGTTCCAACGATTCAACCGTCACCAACAGAAGAAGAAGAAGAAGCGGAAGCCCGACAACAGCCTTGGAGAAATCGAAGAAGCAGCGCTGCGAGAAACCGATGAAACCGTACCGAGGAATAAGGATGAGGAAGTGGGGAAAGTGGGTGGCGGAGATCAGAGAGCCGAACAAGAGGTCAAGGATTTGGTTGGGTTCTTACACGACGCCCGTCGCCGCAGCACGCGCCTACGACACCGCCGTTTTCTACCTCCGAGGGCCCTCCGCGCGCCTCAATTTCCCCGAACTTTTGTTCCAGGACGAGGTCGACGGCGCCAACGATGACGATTCCGTGAACATGTCCGCTGATTCCATTCGCCGCAAAGCCACGCAAGTCGGCGCCAGAGTCGACGCGCTCCAAACCGCGCTTCACCATCACGCGCCCTCGCACAACCCCACTCTAATCTCTCTCAAACCCGACTTGAACGAGTTCCCAAAACTCGAAGACCTTCAAGATTGA 525 0.5543 MLVMEDRDHCCSNDSTVTNRRRRRSGSPTTALEKSKKQRCEKPMKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPELLFQDEVDGANDDDSVNMSADSIRRKATQVGARVDALQTALHHHAPSHNPTLISLKPDLNEFPKLEDLQD 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00707 174 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
Vian7g00707 174 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 30 172 - -
Vian7g00707 174 SUPERFAMILY DNA-binding domain 46 104 IPR016177 GO:0003677
Vian7g00707 174 Gene3D AP2/ERF domain 46 104 IPR036955 GO:0003700|GO:0006355
Vian7g00707 174 CDD AP2 47 105 IPR001471 GO:0003700|GO:0006355
Vian7g00707 174 FunFam Ethylene-responsive transcription factor 2 45 104 - -
Vian7g00707 174 Pfam AP2 domain 47 95 IPR001471 GO:0003700|GO:0006355
Vian7g00707 174 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Vian7g00707 174 PRINTS Ethylene responsive element binding protein signature 85 105 IPR001471 GO:0003700|GO:0006355
Vian7g00707 174 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Vian7g00707 174 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00707 Vian-Chr7 15289588 15290112 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00707 45 148 AP2-EREBP Transcription Factor Family AT5G67190 70.370 1.46e-48 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Vian7g00707 AP2 3e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00707 K09286 - gmx:547642 259.225