Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00675 ATGAGTTGCAACGGTTGTCGAGTGCTGCGAAAAGGTTGCAGTGAAACATGTCCTTTGAGGTCGTGTCTGCAATGGATCGAATCCGCTGAATCGCAAAGACATGCCACTCTTTTCCTTGCTAAGTTCTTCGGCCGCACCGATTTAATGTCCTTCATTGCTTCTGTTCCCCAAACCAGAAGACCTGCATTGTTTCAGTCTCTGCTGTTTGAAGGGTGCGGGCGAACGGTAAATCCGGTGAACGGCGCCGTGGGACTTCTGTGCAGCGGAAACTGGCACCTGTGTGAGGCCGCTGTGGAGACGGTGCTCGCCGGAGGCGTTCTTCGAGCGCAGCCGGATACAGTGGCTGGAGCTTCCACTGGTATACGCCGCCCTTTCCGGCCACTAAGATTGGAACATGATGCGAGGGAGATGAATGAGAACTCATCAAGTTTGATGAACAGAGCAGAGGAACCGGAAACGGTGGGTTACGGTGGTCACAAGAAAAATCAGATCTTAAATTTGTTCATGTAA 510 0.5176 MSCNGCRVLRKGCSETCPLRSCLQWIESAESQRHATLFLAKFFGRTDLMSFIASVPQTRRPALFQSLLFEGCGRTVNPVNGAVGLLCSGNWHLCEAAVETVLAGGVLRAQPDTVAGASTGIRRPFRPLRLEHDAREMNENSSSLMNRAEEPETVGYGGHKKNQILNLFM 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00675 169 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 139 - -
Vian7g00675 169 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Vian7g00675 169 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00675 Vian-Chr7 14893874 14895295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00675 1 121 AS2 family AT4G37540 75.207 1.46e-61 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vian7g00675 LOB 1.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00675 - - gmx:100796966 270.011