Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00652 ATGGCAGAAGAGAGTGTGGATTGGTGGAAGGAGTTGAGTATGGATTGGGATGACTTGAATGGTGTGTCATCGGACACCTCTAATGTTCCAACCACCTTCCACAACCATCCTTTTCCGATCGTTGTCGAAGCTCCTCGGATGTTGCTACCATCTCAAACATCCGAGCACATACAGTTTCACTCGAACAAAGGAAGAAGGATAACATGGACGAAAGTGGAGCATAGGGGATTTTTAGAAGGACTTGATATATATGGAAAAGGAAATTGGAAAAAGATTTCAGCCTACATTCAAACCAAGAGTGCAAGTCAAGTGGCAAGCCATGCACAAAAGTATTTTATCCGCCAAAGTAAATCAAAAGAGCAAAAGAAGAGAAAAAGTATTCATGACATGGTTATAGAGAATACCACTCATACTAATATTCATATTCAAAATTCATCATCAAACAGAAATCTTGCAGGTTCACAATTTTTGGAAATGCAACCACAACAAGTGATACCCTTCAATCCTCACATCAACATGCCTCATCCACAAGAGCTAAATCATATCAACATGACTTATCAACAGTTAGAAGAAATGATCAACCAAAATCATATGAATTCCAACAACATAATTGATCATAATGCAAACTTTAATCAAATGCAACCCTCACAAATGATACCCTTCAATCCTTACATCGACATGCTTCATCCACCAGAGCTAAATCATATCAATACCTTAAATCAGCACTTACAAAAATTATGGAATACATTCAATACATCCCACAGAGCTTAA 771 0.3761 MAEESVDWWKELSMDWDDLNGVSSDTSNVPTTFHNHPFPIVVEAPRMLLPSQTSEHIQFHSNKGRRITWTKVEHRGFLEGLDIYGKGNWKKISAYIQTKSASQVASHAQKYFIRQSKSKEQKKRKSIHDMVIENTTHTNIHIQNSSSNRNLAGSQFLEMQPQQVIPFNPHINMPHPQELNHINMTYQQLEEMINQNHMNSNNIIDHNANFNQMQPSQMIPFNPYIDMLHPPELNHINTLNQHLQKLWNTFNTSHRA 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00652 256 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Vian7g00652 256 CDD SANT 68 112 IPR001005 -
Vian7g00652 256 Gene3D - 67 117 - -
Vian7g00652 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 116 IPR017930 -
Vian7g00652 256 SUPERFAMILY Homeodomain-like 64 117 IPR009057 -
Vian7g00652 256 NCBIfam myb-like DNA-binding domain, SHAQKYF class 65 115 IPR006447 GO:0003677
Vian7g00652 256 ProSiteProfiles SANT domain profile. 69 116 IPR017884 -
Vian7g00652 256 PANTHER TRANSCRIPTION FACTOR KUA1 17 226 - -
Vian7g00652 256 ProSiteProfiles Myb-like domain profile. 61 112 IPR001005 -
Vian7g00652 256 SMART sant 65 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00652 Vian-Chr7 14622890 14623807 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian7g00652 Myb_DNA-binding 2.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00652 - - vra:106774767 365.925