Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00626 ATGGGCAGAGCTCCTTGCTGCGACAAAGCAAACGTGAAGAAAGGTCCATGGTCTCCAGAAGAAGATGCTAAGCTCAAATCCTACATAGAAAAACATGGCACTGGTGGTAACTGGATTGCTTTGCCTCAAAAAATAGGCCTTAAGCGATGTGGCAAGAGTTGCCGCCTTAGGTGGCTGAACTATCTTCGCCCTAATCTCAGGCACGGTGGTTTCTCTGAGGAAGAAGACAACATTATTTGCAGCCTTTACATCAGTATCGGAAGCAGGTGGTCGGTGATTGCAGCACAGTTGCCGGGAAGAACTGATAATGACATAAAGAACTACTGGAACACGAGGCTGAAAAAGAAGCTTCTAGGGAAGCATCGAAGAGAGCCACGTAATAGAGGCAATTACAACAGTGTTAAGCAAGAAATTAGTGATGCTAATAGAAGGAGTAGCGATGGTGATTCTTCTTCCTTATCCATGGTTCAGGAAAATAGTAGCACTAGTCAACAACATCACCAACAACAACATCAACAATTATGTTGGCCACAGAACATCAACATGCCAGTGCTGCCACTACCCATAATACCCTTGCCATACACAACAAGCCAAGGTCCAGGTTTCAACGACCAAGATTCCATCAAGAAACTCCTGATCAAACTAGGAGGAAGATTTTCAGGTGATTATTACCAGCCTACCCTTGATGGGTTGAACCTTCAATTCTCCTCACAAGGGCAACAAGTTTACCAAGAACAAGTCCATGTTGGTTCCTCTTCTTCTTCAGCCTGCATTGTTGCCAACAACGAGGTACACTTTGGACAAACTGGTCAATACTCTGGAGTTGATGACATGATGCAAGGACAAGATGGTAATTTCACCCCATCATTTGAGGAAATGGTGCCTTCTTCTAATTATTCAGATGGGTTAGAGTTCTTGTACAATGAAGGCATGATCCTCCACAAGATAACAGATTCTACTATCACTACTACTTGTGACCAAAACACCACCACCACCACAAATTGGGATGAAACCACCACTTCCATTTATCACCATGATTCACTTGCTTCCCATTTTGAAGGTCAAGAATGTGCTTTGCAAGAGTTTAGCTACCCAGGGGCACAATAA 1107 0.4372 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNLRHGGFSEEEDNIICSLYISIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRREPRNRGNYNSVKQEISDANRRSSDGDSSSLSMVQENSSTSQQHHQQQHQQLCWPQNINMPVLPLPIIPLPYTTSQGPGFNDQDSIKKLLIKLGGRFSGDYYQPTLDGLNLQFSSQGQQVYQEQVHVGSSSSSACIVANNEVHFGQTGQYSGVDDMMQGQDGNFTPSFEEMVPSSNYSDGLEFLYNEGMILHKITDSTITTTCDQNTTTTTNWDETTTSIYHHDSLASHFEGQECALQEFSYPGAQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00626 368 MobiDBLite consensus disorder prediction 119 173 - -
Vian7g00626 368 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Vian7g00626 368 PANTHER OS09G0431300 PROTEIN 1 296 - -
Vian7g00626 368 CDD SANT 71 113 IPR001005 -
Vian7g00626 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Vian7g00626 368 SMART sant 67 115 IPR001005 -
Vian7g00626 368 SMART sant 13 64 IPR001005 -
Vian7g00626 368 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Vian7g00626 368 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Vian7g00626 368 MobiDBLite consensus disorder prediction 131 173 - -
Vian7g00626 368 CDD SANT 16 62 IPR001005 -
Vian7g00626 368 FunFam Transcription factor MYB36 70 142 - -
Vian7g00626 368 Gene3D - 70 174 - -
Vian7g00626 368 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Vian7g00626 368 Gene3D - 7 68 - -
Vian7g00626 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Vian7g00626 368 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Vian7g00626 368 FunFam Transcription factor RAX3 7 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00626 Vian-Chr7 14269627 14271243 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00626 1 214 MYB Transcription Factor Family AT3G49690 58.986 5.80e-84 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vian7g00626 Myb_DNA-binding 1.4e-14 CL0123