Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00621 ATGGGAAGAGCTCCTTGTTGTGACAAAGCCAATGTCAAAAGAGGACCATGGTCCCCCGAAGAAGATGCAACACTCAAAGCCTATGTGGAGTCTCATGGAACTGGTGGAAATTGGATTGCATTGCCCAAAAAAGCTGGTTTTTCTCTCTTCTTTCCCAATACTTATTCACATTTTTCAAACACCTTCTTCTCATTTCAATGGTCTGCCATAGCCTCTAAACTTCCTGGCAGAACCGACAATGATGTGAAAAACTACTGGAACACGAAACTGAAGAAGAAGATAATGGCAGGAAAAGTTAGTCTCAAAACATTGACCGAAAATGACACTCTTCCTTCAACTTCAACCCCATTACCAACCAACCAAAGTCTGAAAACTCAAAATTCACCTTTCAATGTTTCACCAAATCAGCTAGCCTTGGTGCTACCAATCTTAGAAGCAAATGATAACAATGCATTCACAGATAATCAAAAAAACATCATTAGTTTTGACCAAACAAAGCATCATGGGTTGTACAGTCCACAAGTCATGCATGGTGTCTCACAGATTGGTGCAAGTTCAAGGATCAACAATAACACCAACGAAAGTAACAGTAACAGTCACATGGTGTCATTGTCTCAAGAAGGTTCAAGCAGCATTTCGGATTCATCTTCCATTGCAATGAATTACAACAAGTGTGTCGTGTCACAGCCTCAACAGCAGCAGCAAGAGCAACAACAACATTGTATTGATGAATCTATGGAAATGTTGGTGGATTTTGGCTTTGGATTTCCCTATGATTTTGCTAACTGCCATTATGAGAGAGTTGGTGAAACTTTTGCTCCAGAGTGGGTTGATTTTAGCTATGCTGACATTAAGCCACATTGA 864 0.4028 MGRAPCCDKANVKRGPWSPEEDATLKAYVESHGTGGNWIALPKKAGFSLFFPNTYSHFSNTFFSFQWSAIASKLPGRTDNDVKNYWNTKLKKKIMAGKVSLKTLTENDTLPSTSTPLPTNQSLKTQNSPFNVSPNQLALVLPILEANDNNAFTDNQKNIISFDQTKHHGLYSPQVMHGVSQIGASSRINNNTNESNSNSHMVSLSQEGSSSISDSSSIAMNYNKCVVSQPQQQQQEQQQHCIDESMEMLVDFGFGFPYDFANCHYERVGETFAPEWVDFSYADIKPH 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00621 287 Pfam Myb-like DNA-binding domain 66 88 IPR001005 -
Vian7g00621 287 PANTHER OS09G0431300 PROTEIN 66 241 - -
Vian7g00621 287 SMART sant 13 92 IPR001005 -
Vian7g00621 287 ProSiteProfiles Myb-like domain profile. 9 90 IPR001005 -
Vian7g00621 287 Gene3D - 11 95 - -
Vian7g00621 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 94 IPR017930 -
Vian7g00621 287 SUPERFAMILY Homeodomain-like 11 86 IPR009057 -
Vian7g00621 287 MobiDBLite consensus disorder prediction 189 210 - -
Vian7g00621 287 CDD SANT 16 90 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00621 Vian-Chr7 14126110 14128715 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00621 1 96 MYB Transcription Factor Family AT2G36890 57.143 4.67e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian7g00621 Myb_DNA-binding 8.5e-06 CL0123