Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00608 ATGGGTATCTGCATATCAGTTTCAGAAAAAGATGATGATGAGAATGTGACAATATTTGAAGAAAGGAAGAAGGTCCTGAATGGGAGTCAGATACTCTTCTCTGTTTACTCCAAACAGGGTACCAAAGGACTCAACCAAGATGCTGCCTCTATTCACCAGGGTTATGGAACGGAAGATGGAACATTTTGTGGTGTTTATGATGGTCATGGAGGGAATGGACACAGAGTGAGTAAAATAGTAAGCAGACAATTATCTTCCCTCATTCTGGAACAAAAGAATGCTCTTGAAAAGATTGATGCTATAGAAAATGGTTGTCACAACACCACCCCAAAAGACCATGTTGGCACAATGAAAGAGAACTCAGATGCAAACAACTTTCAGAAATGGAAAGAAGCAATTGTTAGTGCCTTCAAGGTGATGGAGAAAGAGGTCAAGCTTCAACATAATCTAGATTGCTCTGGCAGTGGAACCACTGCTGTAACTATCATAAAACAGGGTGAAGGTCTTATCATAGCAAATCTGGGTGATTCGAGAGCAGTGATGGGAACGATATGTGAAGAAAAACTCGTAGCCACCCAATTGACCACGGATTTGAAGCCCGAGTTACCTCGTAAGATTCTTCTTGTAAACTATATATACCTTGCAGATTCTTCTTCTGGGACACCACTTTTCTTGAGGTCTAAACCTGAAATGCTTGTACTAATATCACTTTATGGAGAAGCAGAAAGAATAAGAAGGTGCAATGGTTGTGTGTATGCATCAAAGGAAGAACCAGAAATCCAGAGAGTGTGGATGCCCAACAATGAACACTCCCCTGGCCTAGCCATGTCTCGATCTTTTGGAGATTTCTTGCTCAAGGATTATGGTGTTATTGCTATCCCAGATATTTCTCACCACCCTTTAGGATCAAGTGATCAATTTATTGTTCTTGCCAGTGATGGGGTGTGGGATGTACTAAGCAACAACGAGGTTGCATCAATTGTGTGGAGTGCAGAGAGTGAAGAGGTTGCAGCAAGAGCAGTAGTGGAAGCAGCAACTGCTGCATGGAAAAACAAGTTTCCTTCATATATGGCAGATGACTGCACTGTGGTTTGTCTCTTCTTGCACCAGAAACCACAGCTTCAGCCATTTCAAAACTAA 1140 0.4184 MGICISVSEKDDDENVTIFEERKKVLNGSQILFSVYSKQGTKGLNQDAASIHQGYGTEDGTFCGVYDGHGGNGHRVSKIVSRQLSSLILEQKNALEKIDAIENGCHNTTPKDHVGTMKENSDANNFQKWKEAIVSAFKVMEKEVKLQHNLDCSGSGTTAVTIIKQGEGLIIANLGDSRAVMGTICEEKLVATQLTTDLKPELPRKILLVNYIYLADSSSGTPLFLRSKPEMLVLISLYGEAERIRRCNGCVYASKEEPEIQRVWMPNNEHSPGLAMSRSFGDFLLKDYGVIAIPDISHHPLGSSDQFIVLASDGVWDVLSNNEVASIVWSAESEEVAARAVVEAATAAWKNKFPSYMADDCTVVCLFLHQKPQLQPFQN 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00608 379 CDD PP2Cc 31 330 IPR001932 -
Vian7g00608 379 PANTHER PROTEIN PHOSPHATASE 33 366 IPR015655 GO:0004722|GO:0006470
Vian7g00608 379 Gene3D - 13 371 IPR036457 -
Vian7g00608 379 SMART PP2C_4 22 366 IPR001932 -
Vian7g00608 379 ProSiteProfiles PPM-type phosphatase domain profile. 32 368 IPR001932 -
Vian7g00608 379 SUPERFAMILY PP2C-like 23 370 IPR036457 -
Vian7g00608 379 Pfam Protein phosphatase 2C 61 203 IPR001932 -
Vian7g00608 379 Pfam Protein phosphatase 2C 239 346 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00608 Vian-Chr7 13980734 13983387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00608 23 368 PP2C-type Phosphatase Gene Family AT3G02750 45.333 3.25e-95 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00608 - - gmx:100815312 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00608 7 13980734 13983387 Vian7g00608 7 13980734 13983387 ECH
Vian7g00608 7 13980734 13983387 Vian4g02143 4 38267567 38269147 PCT