Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00596 ATGCCAAAGATGAAGCACCTTCTCAGAAAGCTTCACATCGGTGGTGGCGCTGCCACCATCAATCACAATCACAATCATAACGCATTGTCCTCGCACGAGCATCACGCTCCCTCCACTTCCACGCTCTCTTCGCCCACCATAGTTTCGGATCCGACGCCGACTCGGAGCCCCGTTGTGGAGGCGCAGAACGACGTGGTGGAGTTCAACTTGTTGCAGGAGGAGGAGTTTCAGATGCAACTAGCGCTCGCAATCAGCGCTTCCGATTCCGATCGCCGTGACACCGCGGAATCTGCGCAGATCGACGCCGCAAAACAGATCAGCCTCGGTTACTCTGCTTCGTTCACTGACACTCATGCCCTAGTTCAGTTTCAATCGCTTCGTTATTGGAACTACAATGTGATTGGTTATGATGAGAAAGTGATGGATGGGTTTTATGATGTGTTTGGGGTTACCTCGAATTTGGTTGATCGAGGGAAGATGCCATTGTTGGTGGATCTGCAGACGGCTCCTGTCTCAGGAGATGTCGATTGTGAGGTGATTTTGGTGAACCATGTTGTAGATCTTGAGCTTAATCAGCTTGAGAGGAAGGCGTGTAGTTTGGTTGAGGAGTGTTGTGTTTCTGAACTGGGGCTGATTTTGAGTGGCTTGCTTCAGAAGCTCGCGGATGTTGTTGTTAATAGAATGGGTGGACCTGTTACTAATGCTGAGAAACTTACTAAGAGTTGGGCTATGAGGAGTCGTGAGTTACGGGATTCTATGCAAACCATTGTTCTTCCCCTTGGCTGTCTTGATGTTGGACTTTCACGTCACCGAGCCCTACTTTTTAAGGTACTTGCTGATAGGATTAACATTCCCTGCATGCTGGTAAAAGGGAGCTATTATACAGGAACTGATGATGGGGCTGTGAATATGATTAAAGCTGATGATGGAAGTGAGTACATCATTGATATGATGGGTGCCCCTGGAACTCTTATTCCTGCTGAGGTACCCAGCAGCCAGCTCGAAAGCACCAGTTTTTCTGTTAGGGGTTGTGCAGAGATTGTTGGATTACCAGAGAAGACAGGTTCAATGGTAGATGATGGAACTGGTGCGCCAGGAGTCTTTTCTGATTGTGGTAGAATTTCAACAGTGGGGAGAGTCCGGACAGAAGAATTATTAGTTATGGGCAGTCAAACAGAGCCTGATGAAATTAATCATGTTAAAGTAAATGAGACAAGGAGATTTGAACATACAGAAGCATACGAATGCTCATCACATACAGGACCTGCAGAGAATATGCATGTAAAAAATGTCTCTAAGTATGTTCTCAGTGCAGCAAAGGACCCAGAATTTGCCCAAAAATTACATAATGTTCTACTAGAGAGTGGTGCCTTACCTCCTCCTGATCTTTTTTCAAATATAAATTCCCAGGATAGGGGTGTAGATAATGTTAATGAAAAAAATGTTGATTCTGTTCAAGATGACACAAATAGATTATTATTGTTAAGGTATGAAAAATCTCACATGCCCTCACATGGGTTGGGCTCTGCCAGTGATACTAGGTTATGTCAATCAGCTGACTGCTTATCTGAACAACAAAAAGAATTGCACACAGATGTTGAATTTTGCAATTCTTCACAGAGTGATAATATAAGGAACGGGTTTTTACATGCTTCTGATAGGGATATTGATTTAGAGAAATCTAACGCAATGAATGTTGTTTTGGCTTCTATACACTCACATAATAAGTTATGTAAAGAAAAGTGTACTGGATCTTCTTTGCCCAAGGCAGCTCTTTCCTGTAAAGTGGATAATGGGATTGGTTGTTTCTGTGAAGATGATGAAAATGGCTATGGAAAGAATGTAGGAGTTTCTTTTAATAACAGAGGGTTGGGCAAAGATTCAGCTGTTCAGAGAAATGAGATGGAGGTTAATGGAGAATGCTATGATGGTAGAAACAAGGAAGTTAACCAAGTGCTTGGTGAAGGCTCAGAATGGGAAATTCAATGGGAGGATCTTGATATTGGTGAGCGTATTGGTATTGGTTCGTATGGTGAAGTTTATCGTGCCGATTGCAATGGCACTGAAGTTGCCGTAAAGAAGTTTCTGGACCAAGATTTCTCTGGTGATGCACTAGCTCAGTTCAAATCTGAAGTTGAGATCATGCTAAGGCTGCGACATCCTAATGTTGTGCTCTTCATGGGAGCAATTACTCGGCCCCCACATTTCTCGATCTTGACCGAATTTCTTCCAAGAGGCAGTTTATATAGGCTACTGCATCGTCCCAATATTCGGCTTGATGAGAAGAAAAGGTTGCGCATGGCTCTAGATGTGGCTAAGGGAATGAATTACTTGCACACGAGCCATCCTCCCATTGTACACCGAGATTTGAAGTCTCCAAATCTTCTTGTTGACAGGCATTGGATTGTTAAGGTTTGTGATTTTGGTCTGTCAAGAATGAAGCACCATACATTTTTGTCATCAAAATCTTGTGCTGGAACGCCTGAGTGGATGGCACCGGAAGTCTTAAGAAATGAGCCAGCCAATGAGAAGTGTGATGTATATAGTTTTGGTGTGATCTTGTGGGAGTTGATTACTACAAGAATTCCCTGGAAAGGTTTGAACCCAATGCAGGTTGTTGGAGCTGTTGGATTCCAAAACAAACGGCTTGAAATTCCAGAAGATGCCAATCCAGTAGTAGCACAGATTATACGTGATTGCTGGCAAACGGAGCCACACTTGCGGCCATCTTTCTCACAGCTGATGTCTCGTCTTTACCGTGTTCAACATATGGTTGCCCCAAAAACGGGTTCAACACATTAA 2802 0.4372 MPKMKHLLRKLHIGGGAATINHNHNHNALSSHEHHAPSTSTLSSPTIVSDPTPTRSPVVEAQNDVVEFNLLQEEEFQMQLALAISASDSDRRDTAESAQIDAAKQISLGYSASFTDTHALVQFQSLRYWNYNVIGYDEKVMDGFYDVFGVTSNLVDRGKMPLLVDLQTAPVSGDVDCEVILVNHVVDLELNQLERKACSLVEECCVSELGLILSGLLQKLADVVVNRMGGPVTNAEKLTKSWAMRSRELRDSMQTIVLPLGCLDVGLSRHRALLFKVLADRINIPCMLVKGSYYTGTDDGAVNMIKADDGSEYIIDMMGAPGTLIPAEVPSSQLESTSFSVRGCAEIVGLPEKTGSMVDDGTGAPGVFSDCGRISTVGRVRTEELLVMGSQTEPDEINHVKVNETRRFEHTEAYECSSHTGPAENMHVKNVSKYVLSAAKDPEFAQKLHNVLLESGALPPPDLFSNINSQDRGVDNVNEKNVDSVQDDTNRLLLLRYEKSHMPSHGLGSASDTRLCQSADCLSEQQKELHTDVEFCNSSQSDNIRNGFLHASDRDIDLEKSNAMNVVLASIHSHNKLCKEKCTGSSLPKAALSCKVDNGIGCFCEDDENGYGKNVGVSFNNRGLGKDSAVQRNEMEVNGECYDGRNKEVNQVLGEGSEWEIQWEDLDIGERIGIGSYGEVYRADCNGTEVAVKKFLDQDFSGDALAQFKSEVEIMLRLRHPNVVLFMGAITRPPHFSILTEFLPRGSLYRLLHRPNIRLDEKKRLRMALDVAKGMNYLHTSHPPIVHRDLKSPNLLVDRHWIVKVCDFGLSRMKHHTFLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELITTRIPWKGLNPMQVVGAVGFQNKRLEIPEDANPVVAQIIRDCWQTEPHLRPSFSQLMSRLYRVQHMVAPKTGSTH 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00596 933 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Vian7g00596 933 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Vian7g00596 933 CDD STKc_MAP3K-like 672 918 - -
Vian7g00596 933 ProSiteProfiles Protein kinase domain profile. 666 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00596 933 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 158 921 - -
Vian7g00596 933 Pfam Ethylene-responsive protein kinase Le-CTR1 122 325 - -
Vian7g00596 933 Gene3D Transferase(Phosphotransferase) domain 1 745 929 - -
Vian7g00596 933 Gene3D Phosphorylase Kinase; domain 1 659 743 - -
Vian7g00596 933 PRINTS Tyrosine kinase catalytic domain signature 779 797 IPR001245 GO:0004672|GO:0006468
Vian7g00596 933 PRINTS Tyrosine kinase catalytic domain signature 740 753 IPR001245 GO:0004672|GO:0006468
Vian7g00596 933 PRINTS Tyrosine kinase catalytic domain signature 845 867 IPR001245 GO:0004672|GO:0006468
Vian7g00596 933 PRINTS Tyrosine kinase catalytic domain signature 826 836 IPR001245 GO:0004672|GO:0006468
Vian7g00596 933 PRINTS Tyrosine kinase catalytic domain signature 889 911 IPR001245 GO:0004672|GO:0006468
Vian7g00596 933 MobiDBLite consensus disorder prediction 21 56 - -
Vian7g00596 933 SMART serkin_6 666 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00596 933 FunFam Serine/threonine-protein kinase isoform 1 657 744 - -
Vian7g00596 933 Pfam Protein tyrosine and serine/threonine kinase 667 918 IPR001245 GO:0004672|GO:0006468
Vian7g00596 933 SUPERFAMILY Protein kinase-like (PK-like) 656 919 IPR011009 -
Vian7g00596 933 FunFam Serine/threonine-protein kinase CTR1 745 928 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00596 Vian-Chr7 13836258 13844347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00596 618 924 MAP Kinase Kinase Kinase AT5G11850 78.065 7.11e-173 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Vian7g00596 PK_Tyr_Ser-Thr 6.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00596 K04424 - gmx:100779137 1586.62