Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00575 ATGGGTGCATCTGGAAAATGGGTGAAGGCGTTGATCGGACTCAACAGCAAGAATGAACTTGGAGGGAAGAAGAAGAAGTGGAGACTGTGGAAGAGTTCTTCTGCAGGGGAGAACAGATCTCAAGACTTCGAGTATTGCAGTGTGGCTTCCGATTCTTTCACCGCTGCAGTGGCCACAGTTGTCAGAGCTCCACCTAAGGATTTCAAACTCCTCAAGCAAGAATGGGCTGCCACCCGAGTTCAAACTGCTTTCCGTGCCTTCTTGGCAAGAAGGGCATTGAGGGCGTTGAAGGGAGTGGTGAGGCTTCAAGCTCTTGTAAGGGGTAGACTTGTGAGGAAGCAGGCTGCAGTCACACTGAGGTGCATGCAGGCCTTGGTTCGTGTCCAGGCACGTGTGAGGGCGCGGCGCGTGCGCATGTCCATGGAGGGGCAAGCAGTTCAAAACATGCTAAATGAACGCCGCACCAAGGCTGAACTCAACAAGGAAGCAGAGGATGGTTGGTGTGATAGCAAAGGATCTCTGGAACATGTCAGGACAAAACTACAAATGAGGCAAGAGGGAGCTTTCAAGAGGGAGAGAGCAATTGCATACTCTCTTGCCCAAAAGCAATGGAGATCAACCCCCATTTCAAATTCAAGAGCAAACACCTCTTTGAACAAGCAAGAGATAGACAAGGCTAACTGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCAAAGCCATGGGAGAGTAGATTGATGGAACAAACTCGTCATCAAGCTGATGCCACAGAGAAAACTCCTCCTCCTCCTCCAAAGAAATGCGTGGACCCCACAAATTCGAAAAATATTTCAGAACCATGCAGTGTCAAAGTCAGAAAGAACAATGTTACCACAAGGATTTCAGCTAGACCTCCTCATATTGGCCAAGCCACTCGTTTCTCCTCTAGTCCTAGTTCTGAGTTTCACTACGATGAGAGCTCTAATTCATCTTCAATATGCACATCCATGACACCAATATCTGGGAGTGTTTCTTTGCCTTGTGAGAGGACAGAGGATAGTAACAACAGTACTACTAGGCCTAGTTACATGAACCTGACCGAGTCAACCAAGGCAAAGCAGAAAACCAGCAGTCATCAATACAACAGATCTCAGAGGCAACAGTCCATGGATGAGTTCCAGTTTCTCAAAAGGACAGCGGTTTTCTCAAATGGAGATGCCAAAAGCACTGGTGCTTCTGACCCTTCAACCAACTTTTCTAGGCCACTTTACCTACCCACCTACATGGATAAGAAGCCACGGTGA 1284 0.4821 MGASGKWVKALIGLNSKNELGGKKKKWRLWKSSSAGENRSQDFEYCSVASDSFTAAVATVVRAPPKDFKLLKQEWAATRVQTAFRAFLARRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQNMLNERRTKAELNKEAEDGWCDSKGSLEHVRTKLQMRQEGAFKRERAIAYSLAQKQWRSTPISNSRANTSLNKQEIDKANWGWSWLERWMAAKPWESRLMEQTRHQADATEKTPPPPPKKCVDPTNSKNISEPCSVKVRKNNVTTRISARPPHIGQATRFSSSPSSEFHYDESSNSSSICTSMTPISGSVSLPCERTEDSNNSTTRPSYMNLTESTKAKQKTSSHQYNRSQRQQSMDEFQFLKRTAVFSNGDAKSTGASDPSTNFSRPLYLPTYMDKKPR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00575 427 MobiDBLite consensus disorder prediction 398 416 - -
Vian7g00575 427 MobiDBLite consensus disorder prediction 398 427 - -
Vian7g00575 427 MobiDBLite consensus disorder prediction 271 385 - -
Vian7g00575 427 PANTHER IQ-DOMAIN 5-RELATED 1 390 - -
Vian7g00575 427 ProSiteProfiles IQ motif profile. 73 101 IPR000048 GO:0005515
Vian7g00575 427 MobiDBLite consensus disorder prediction 248 385 - -
Vian7g00575 427 Pfam Protein of unknown function (DUF4005) 323 404 IPR025064 -
Vian7g00575 427 ProSiteProfiles IQ motif profile. 97 124 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00575 Vian-Chr7 13548633 13550896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00575 1 427 IQD Protein Family AT2G26180 58.239 4.49e-140 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00575 - - gmx:100787102 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00575 7 13548633 13550896 Vian4g02125 4 38090241 38092254 PCT