Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00564 ATGGCTTCTGATCTTTTCATGTGTGATGTAGACCTACTGTTGGCAACATTGTGTACTCGTTCAATACAAACTCGTGAAGGAAGTATTGTCAAGGCCCTTGATTGCAATGCTGCTCTTGCTGGCCGTGATGCTTTGGCGAAAACTGTTTACGCTCGTTTATTTGATTGGCTTGTTGATAAGATCAATATGTCTGTTGGGCAAGACATCAATTCCAAGATACAGATTGGAGTTTTGGATATTTATGGTTTTGAGTGCTTTAAGGATAATAGTTTTGAGCAATTTTGCATCAATTTTGCAAACGAAAAGCTTCAGCAACATTTTAATGAGCATGTGTTCAAGATGGAACAGGATGAGTATGGCAAAGAAGAAATTAACTGGAGTTACATTGAATTTGTAGATAACAAAGATGTTTTAGATTTAATTGAAAAGAAACCCATTGGTATCATTGCTCTGTTGGATGAAGCTTGTATGTTTCCAAAGTCGACTCATGAAACATTCTCAACCAAGTTGTTTCAGCATTTCCGATCTCACCCTAGGTTGGGAAAGGAAAAGTTTTCACAAACAGATTTTACTATTTCTCATTATGCTGGAAAGGTCACGTATCATACAGATACATTTTTAGACAAAAATCGTGATTATGTTGTAGTAGAACATTGCAATCTCTTATCTTCTTCAAAATGCCCTTTCGTTTCTGGTCTATTTCCTTTGCTATCTGAAGAATCTTCAAGATCATCATACAAGTTTTCTTCAGTAGCTGCTAGATTTAAGCAACAACTTCAAGCACTCATGGAGACCCTAAACTCAACAGAGCCTCACTACATACGATGTGTGAAACCAAATTCTTTGAATCGACCACAACAATTTGAAAATGCAAGTGTCATACACCAGTTACGCTGTGGGGGTGTCCTTGAGGCTGTTCGGATAAGTCTGGCAGGTTATCCCACTCGAAGAACTTACTCAGAGTTTGTGGATCGTTTTGGGTTGATAGCTTCTGAATTTATGGATGGAAGTTATGATGATAAAGCTGCAACTGAGAAAATTTTGCAAAAGCTTAAGCTTGAGAATTTTCAGTTGGGTAGGACCAAAGTATTCCTCAGAGCTGGGCAAATTGGTATTTTAGACCAGAGACGTGCTGAAGTTTTAGACAATGCTGCAAAGTGTATCCAGCGCCGCATGAGGACATTTATTGCACATCAGGATTTTATAATTTTAAGATCTGCTGCGATTTCTCTTCAGGCAGGCTGCAGGGGTCACATTGCCCGAAAGATATATGCTGCTAAAAGGGAGACAGCAGCGGCTATCTCCATTCAGAAATATATTCGAATGTGGCTTACAAGGCATGCTCACTTAAAACTGTATTTTTCTGCTATTATCATGCAATCTCATGTTCGAGGTTTTGTGACTCGCCAAAGATTCTTACATGCAAAAGAACATAGCGCTGCTACTTTTGTTCAGGCCTATTGGAGGATGTCCAAGGTTAGGTCATCTTTCCTACGCTATCAAACTTCAATTGTGGCAATACAATGCCTTTGGCGGTGCAGACAAGCAAAAAGAGAGTTACGGAGACTTAAACAAGAGGCAAATGAAGCTGGTGCTCTTCGATTAGCCAAGAATAAACTGGAGAAGCAAATGGAAGATCTCTCATGGCGTTTACATCTTGAAAAGAAAATAAGGGTTTCCAATGAAGAGGCTAAAAAAATAGAGATTTCCAAACTTCAAAAGATGTTAGAAGCTTTGAATCTTGAATTGGATGCTGCTAAATTGGCAAAAATTAACGAGTGCAACAAGAATGCTGTTCTGCAAAATCAATTAGAATTATCAGTAAAGGAAAAGTCCGCTTTGAAACGGGAGCTAGTAGCAGTGGATGAATTGCGAAAGGAAAATGCTTTATTAAAGGTTTCATTGGATGCATTTGAAAGGAAGTACAAGACCTTAGAGCTTGAGCTTATGAATGCTCAAAAAAGCCGGGATGAAACCATGGAGAAACTGAGGGAGTTTGAACAGAAGTGTTCTCAACTCGAGCAAAATGAAGAAAGGCTTGAGGAAAAGTTAAAGAGTTTAGAGAATGAAAATCATGTGCTTCGTCAGAAAGCATTAAGTACCCCTTTTAAGAGTAACCGTCCAGGTTTTGCGAAGTCAGTGTCAGAAAAATACTCTACTGCAATTACCTCTCACACTGATCGAAAGACCATATTTGAGTCACCCACGCCCACAAAACTTATTGCCCCTTTTACAGTAGGCTTGTCAGACTCTCGTCGATCTAAGTTAACAGCAGAGAAGCACCAGGATAACTATGAATTCCTCTCCAAGTGTATAAAAGAAAATTTGGGATTTAAAAATGGTAAACCTATTGCTGCTCGTATTATATATAAATGTCTGCTTCATTGGCATTCATTTGAAAATGAGCGCACAGCGATTTTTGATTCCATCATCGAAGGCATAAATGAGGTTCTAAAGGTTAGGGAGGATGACATTATCCTGCCATATTGGCTGTCCAATACCTCTGCGCTTCTATGCCTTTTACAGAGGAACTTACGGTCAAATGGTTTTTTAACTGCCACTGCTCAGCGTTATCCTGGATCTTCTGGTTTAACCAGCCGGACAGGACATGGACCAAAATCTCCGTTGCAATTTATAGGGTATGATGATGGTGTATCACATGTGGAGGCAAGATATCCTGCTATACTTTTTAAACAACAGCTAACTGCTTGTGTAGAGAAGATTTTTGGTCTGTTGCGTGACAATTTGAAAAAAGAACTTTCTCCACTTCTGGGATCATGTATTCAGTCACCCAAAACAGGACGAGGAGTGCAAGGGGCAAAATCGTCTAGATCTCCAGGTGGGATTCCCCAACCATCATCTGGTGGTCAGTGGGATAACATTGTCAAATTTTTGGATTCTCTCATGAGCAAACTTCGTGGAAATCATGTCCCATCCTTCTTCATCCGTAAACTAGTTACCCAAGTGTTTTCCTTCATCAATATTACACTCTTCAACAGTCTTCTCTTGCGTCGGGAATGTTGCACTTTCTCAAATGGTGAATATGTGAAGTCTGGTCTAGCAGAACTGGAGAAATGGATTGTTAATGCAAAGGAAGAGTATGCAGGGACATCCTGGCATGAGCTCAATTACATACGACAAGCTGTTGGGTTCTTGGTAATACATCAGAAAAGAAAGAAATCTTTGGAAGAGATTCGGCAAGATCTTTGTCCGGCATTGACAGTGAGGCAAATCTATCGAATCAGTACAATGTACTGGGATGACAAGTATGGAACCCAAAGTGTGTCCAATGAGGTGGTTAGTGTAATGAGAGAAATTGTCAGCAAGGACAATCAGAACCTGACCTCAAATTCCTTCTTATTGGATGACGATCTGAGCATTCCTTTCTCTGCTGAAGACATAGATATGGCTATCCCTGCCATAGATCTTGATGAGATTCATCTTCCAGAATTTGTGTCCGAATATTCCTGTGCTCAGTTTCTTATTTCACATCAGAAGTAA 3501 0.3973 MASDLFMCDVDLLLATLCTRSIQTREGSIVKALDCNAALAGRDALAKTVYARLFDWLVDKINMSVGQDINSKIQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQDEYGKEEINWSYIEFVDNKDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFQHFRSHPRLGKEKFSQTDFTISHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSSSKCPFVSGLFPLLSEESSRSSYKFSSVAARFKQQLQALMETLNSTEPHYIRCVKPNSLNRPQQFENASVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIASEFMDGSYDDKAATEKILQKLKLENFQLGRTKVFLRAGQIGILDQRRAEVLDNAAKCIQRRMRTFIAHQDFIILRSAAISLQAGCRGHIARKIYAAKRETAAAISIQKYIRMWLTRHAHLKLYFSAIIMQSHVRGFVTRQRFLHAKEHSAATFVQAYWRMSKVRSSFLRYQTSIVAIQCLWRCRQAKRELRRLKQEANEAGALRLAKNKLEKQMEDLSWRLHLEKKIRVSNEEAKKIEISKLQKMLEALNLELDAAKLAKINECNKNAVLQNQLELSVKEKSALKRELVAVDELRKENALLKVSLDAFERKYKTLELELMNAQKSRDETMEKLREFEQKCSQLEQNEERLEEKLKSLENENHVLRQKALSTPFKSNRPGFAKSVSEKYSTAITSHTDRKTIFESPTPTKLIAPFTVGLSDSRRSKLTAEKHQDNYEFLSKCIKENLGFKNGKPIAARIIYKCLLHWHSFENERTAIFDSIIEGINEVLKVREDDIILPYWLSNTSALLCLLQRNLRSNGFLTATAQRYPGSSGLTSRTGHGPKSPLQFIGYDDGVSHVEARYPAILFKQQLTACVEKIFGLLRDNLKKELSPLLGSCIQSPKTGRGVQGAKSSRSPGGIPQPSSGGQWDNIVKFLDSLMSKLRGNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSVMREIVSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAIPAIDLDEIHLPEFVSEYSCAQFLISHQK 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00564 1166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 427 IPR027417 -
Vian7g00564 1166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 427 476 IPR027417 -
Vian7g00564 1166 ProSiteProfiles Myosin motor domain profile. 1 378 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian7g00564 1166 Pfam Myosin head (motor domain) 2 366 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian7g00564 1166 Gene3D - 91 234 - -
Vian7g00564 1166 SMART MYSc_2a 1 379 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian7g00564 1166 Coils Coil 621 697 - -
Vian7g00564 1166 Coils Coil 562 589 - -
Vian7g00564 1166 ProSiteProfiles IQ motif profile. 500 529 IPR000048 GO:0005515
Vian7g00564 1166 Gene3D Kinesin motor domain 237 312 IPR036961 -
Vian7g00564 1166 Gene3D Myosin VI head, motor domain, U50 subdomain 1 90 - -
Vian7g00564 1166 MobiDBLite consensus disorder prediction 931 955 - -
Vian7g00564 1166 PANTHER MYOSIN 2 446 - -
Vian7g00564 1166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 476 532 IPR027417 -
Vian7g00564 1166 SMART iq_5 380 402 IPR000048 GO:0005515
Vian7g00564 1166 SMART iq_5 428 450 IPR000048 GO:0005515
Vian7g00564 1166 SMART iq_5 499 521 IPR000048 GO:0005515
Vian7g00564 1166 SMART iq_5 403 425 IPR000048 GO:0005515
Vian7g00564 1166 SMART iq_5 451 473 IPR000048 GO:0005515
Vian7g00564 1166 SMART iq_5 476 498 IPR000048 GO:0005515
Vian7g00564 1166 Coils Coil 597 617 - -
Vian7g00564 1166 ProSiteProfiles IQ motif profile. 455 481 IPR000048 GO:0005515
Vian7g00564 1166 PRINTS Myosin heavy chain signature 74 102 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian7g00564 1166 PRINTS Myosin heavy chain signature 127 155 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian7g00564 1166 Gene3D - 431 478 - -
Vian7g00564 1166 Gene3D - 380 430 - -
Vian7g00564 1166 Gene3D - 479 528 - -
Vian7g00564 1166 SMART DIL_2 984 1091 IPR002710 -
Vian7g00564 1166 Pfam IQ calmodulin-binding motif 455 472 IPR000048 GO:0005515
Vian7g00564 1166 Pfam IQ calmodulin-binding motif 430 448 IPR000048 GO:0005515
Vian7g00564 1166 Pfam IQ calmodulin-binding motif 405 424 IPR000048 GO:0005515
Vian7g00564 1166 Pfam IQ calmodulin-binding motif 478 497 IPR000048 GO:0005515
Vian7g00564 1166 Coils Coil 513 543 - -
Vian7g00564 1166 Gene3D - 313 379 - -
Vian7g00564 1166 ProSiteProfiles IQ motif profile. 404 433 IPR000048 GO:0005515
Vian7g00564 1166 Pfam DIL domain 985 1088 IPR002710 -
Vian7g00564 1166 ProSiteProfiles Dilute domain profile. 808 1109 IPR002710 -
Vian7g00564 1166 CDD MyosinXI_CBD 759 1132 IPR037975 GO:0007015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00564 Vian-Chr7 13407594 13441230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00564 1 1162 Myosins gene family AT4G33200 71.170 0.0 1693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00564 K10357 - gmx:100790815 2120.51