Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00541 ATGACAGACAACAATCCAAAACCACCACCTGATACACCTGACAGTGATGATTTCTGCAACCAGTGGTCTTTTGAGCTCTCTGAGTACATGCAATTCGATGATAACCAATGGATGCATGACGATATTCCGTCTTTTTCTTCTGAGAATGTCTCCAACCAGGTTCATCAACCCAGTAATGTACGTGAGTTTGAAGGAGACGAAAGCTACTTTGAAGGGTCTTCTAGCAGAGAAACTGGTGGACGTGAGAATCGGCAAGTTGTTAGAGAGAGATTTGCATTCAAAACAATTTCAGAGATTGAAGTGCTAGACGATGGATACAGATGGAGGAAGTACGGAAAGAAAATGGTGAAGAACAATCCCAATCCAAGGAATTACTATAGATGTTCAGTGGATGGATGCTCTGTGAAGAAGAGAGTGGAGAGAGATAAGGATGACCCTAGGTGTGTAATAACAACCTACGAAGGAAACCACACACATCCAAGTTCTTCCTAG 492 0.4248 MTDNNPKPPPDTPDSDDFCNQWSFELSEYMQFDDNQWMHDDIPSFSSENVSNQVHQPSNVREFEGDESYFEGSSSRETGGRENRQVVRERFAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCSVKKRVERDKDDPRCVITTYEGNHTHPSSS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00541 163 MobiDBLite consensus disorder prediction 60 83 - -
Vian7g00541 163 FunFam WRKY transcription factor 57 88 162 - -
Vian7g00541 163 SMART WRKY_cls 102 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian7g00541 163 MobiDBLite consensus disorder prediction 40 83 - -
Vian7g00541 163 Pfam WRKY DNA -binding domain 103 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian7g00541 163 SUPERFAMILY WRKY DNA-binding domain 95 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian7g00541 163 MobiDBLite consensus disorder prediction 40 59 - -
Vian7g00541 163 Gene3D WRKY domain 89 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian7g00541 163 ProSiteProfiles WRKY domain profile. 97 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian7g00541 163 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 4 161 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00541 Vian-Chr7 12999475 13000581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00541 35 161 WRKY Transcription Factor Family AT5G26170 49.650 3.56e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian7g00541 WRKY 5.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00541 - - gmx:100796836 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00541 7 12999475 13000581 Vian7g00541 7 12999475 13000581 ECH