Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00538 ATGAGAATGAGGTTGCTAGAAATGGTGACAACTTTTGTTCTTCTGCTGGTTCTTCATCCTCCCTTTCTTAAAACTGTAGAATCACTAAATTTCAACATAACAAACTTCAACGACCCTGAGAGTGAAAGAAACATGGCATACATAGGTGATGGCAAAGCCAGAAACGGCAGCGTAGAACTCAACATTGTGGACTATCTTTTCCGCGTTGGAAGAGCCTTGTACGCAAAACCTCTGCACCTGTGGGACCAATCTTCGGGTGTTCTCACAGACTTCACCACGCGCTTCACTTTCACCATTGACAGAGACAAAAACAAAAACGGCACCTATGCTGACGGTTTCGCCTTCTACATCGCCCCTCATGGCTACCCGATTCCTCCCAACTCAGGTGGTGGCACTTTTGCCCTTTTCAACACCACCTCCAACACCTTTATTCGCCATAACCACGTCCTCGCGGTTGAGTTTGACACATATAATGGCACCATTGACCCACCCATGCAGCACGTTGGCATAGACGATAACTCTCTCGTCTCCGTGACTTCTGGCAAATTTGACATTGACAAAAACCTGGGAAAGAAATGTAACGTTTTGATAACCTACACTTCTTCCAGCAAGACCCTCTTTGTGGCTTGGTCCTTCAACGGAACAGCAACGTCACACTCCAATTCTTCACTTTCTTACACGATTGACCTCATGGAAATTCTACCAGAGTGGGTGGATGTGGGGTTCTCCGCTTCAACAGGCGAATTCACTGAACACAATGTTATTTACACCTGGGACTTTAGTTCAACGTTGAATTCCGATGCTTCGGATAATTCCTCCGGTGGCGGGAACGGAAAACGAAAGGTTTGGGTGATTGCTCTGGCGACTTCTTCGGCGGTCTTGGTGGCCGTGGTTGTGAGTGTTGCAGTCTGGGCAATGATGAGGAAGAAAAGAAGGGATAAGGTTGATAAGAGTAATGATGGTGAAGGTGGAGCCAACTTGGTTAAGTTTGATTTGGATAGAGCAACTATACCAAGAAGATTTGATTACAGAGAACTACTTGCAGCCACCAATGGATTCGCAGATGATAGAAAGCTTGGACGAGGAGCTTCGGGACAGGTTTACAAAGGGATTCTGAGTGATTTGGGGAGGGTTGTTGCGGTGAAAAGGATTTTCGCTAAGTTTGCAAATTCAGAGAGAGTTTTCATCAATGAGGTTAGGGTTATAAGCCGTCTTATACACAGAAACTTGGTGCAGTTCGTAGGGTGGTGCCACGAGCAAGGTGAGTTTCTGTTGCTTTTTGAGTACATGCCTAATGGAAGCCTCGACACTCATCTCTTTGGGGACAAAAAACCTTTGACCTGGGATGTTAGGTACAAGGTAGCATTAGGGGTGGCTGCAGCAGTTCGTTATCTTCATGAAGATGCGGAGCAGTGTTATGTGAAAGGGAATGTGATGGATGTTGTTGATGAGAGACTGAACAAAGAGTTTAATGTGGATGAAATGAGAAGCTTGATCATTGTGGGATTGTGGTGTACTAACCCCAACGACAAGGAAAGGCCAAAGGCTGCACAAGTGATAAAAGTTCTTGAGTTAGAAGCACCATTGCCAGAGCTTCCACTTGATATGCATGATTGTTTTCCTCCTTCTCTAGTTACATATTCAGAACAACCTAATTTTCAGTCCATTCAGACACTACCTTTCACCGACAGCTTTATAAATGTTGGACGTTAA 1713 0.4507 MRMRLLEMVTTFVLLLVLHPPFLKTVESLNFNITNFNDPESERNMAYIGDGKARNGSVELNIVDYLFRVGRALYAKPLHLWDQSSGVLTDFTTRFTFTIDRDKNKNGTYADGFAFYIAPHGYPIPPNSGGGTFALFNTTSNTFIRHNHVLAVEFDTYNGTIDPPMQHVGIDDNSLVSVTSGKFDIDKNLGKKCNVLITYTSSSKTLFVAWSFNGTATSHSNSSLSYTIDLMEILPEWVDVGFSASTGEFTEHNVIYTWDFSSTLNSDASDNSSGGGNGKRKVWVIALATSSAVLVAVVVSVAVWAMMRKKRRDKVDKSNDGEGGANLVKFDLDRATIPRRFDYRELLAATNGFADDRKLGRGASGQVYKGILSDLGRVVAVKRIFAKFANSERVFINEVRVISRLIHRNLVQFVGWCHEQGEFLLLFEYMPNGSLDTHLFGDKKPLTWDVRYKVALGVAAAVRYLHEDAEQCYVKGNVMDVVDERLNKEFNVDEMRSLIIVGLWCTNPNDKERPKAAQVIKVLELEAPLPELPLDMHDCFPPSLVTYSEQPNFQSIQTLPFTDSFINVGR 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00538 570 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Vian7g00538 570 Pfam Protein kinase domain 354 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00538 570 Gene3D Phosphorylase Kinase; domain 1 324 429 - -
Vian7g00538 570 PANTHER - 480 528 - -
Vian7g00538 570 CDD lectin_legume_LecRK_Arcelin_ConA 29 264 IPR001220 GO:0030246
Vian7g00538 570 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 268 IPR013320 -
Vian7g00538 570 Gene3D Transferase(Phosphotransferase) domain 1 472 538 - -
Vian7g00538 570 Gene3D - 26 274 - -
Vian7g00538 570 SUPERFAMILY Protein kinase-like (PK-like) 336 467 IPR011009 -
Vian7g00538 570 Pfam Legume lectin domain 28 271 IPR001220 GO:0030246
Vian7g00538 570 Gene3D Transferase(Phosphotransferase) domain 1 430 471 - -
Vian7g00538 570 FunFam L-type lectin-domain containing receptor kinase IX.1 338 429 - -
Vian7g00538 570 ProSiteProfiles Protein kinase domain profile. 353 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00538 570 ProSitePatterns Legume lectins beta-chain signature. 150 156 IPR019825 -
Vian7g00538 570 ProSitePatterns Legume lectins alpha-chain signature. 234 243 IPR000985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00538 Vian-Chr7 12975108 12977381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00538 457 536 Receptor kinase-like Gene Family AT5G10530 41.975 5.26e-12 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vian7g00538 Lectin_legB 3.1e-64 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00538 - - vra:106763732 784.637