Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00536 ATGGTGACAACTTTTGTTCTTCTGCTGCATCTTCGTCCTCCCTTTCTTAAAACTGTAGAATCACTAAATTTCAACATAACAAACTTCAACGACCCTGAGAGTGCACAAAACATGGCATACATAGGTGATGGCAAAGCCAGCAACGGCAGCGTAGAACTCAACATTGTGGACTATCTTTTCCGCGTTGGAAGAGCCTTGTACGCAAAACCTCTGCACCTGTGGGACCAACCATCGAATGTTCTCACAGACTTCACCACACACTTCACTTTCTCCATTGACAGAGCCAAAAACGGCACCTATGCTGACGGTTTCGCCTTCTACATCGCCCCTCATGGCTACCCGATTCCTCCCAACTCAGGTGGTGGCACTTTTGCCCTTTTCAATACCACCTCCAACACCTTTAATCGCCACAACCACGTCCTCGCGGTTGAATTTGACACTTTCAATGGCACCATTGACCCTCCCATGCAGCACGTTGGCATAGACGATAACTCTCTCGTCTCCGTGACTTCTGGCAAATTTGACATTGACAAAAACCTGGGAAAGAAATGTAACGTTTTGATAACCTACACTTCTTCCAGCAAGACCCTCTTTGTGGCTTGGTCCTTCAACGGAACAGCAACGTCACACTCCAATTCTTCACTTTCTTACACGATTGACCTCATGGAAATTCTACCAGAGTGGGTGGATGTGGGGTTCTCCGCTTCAACAGGCGAATTCACTGAACACAATGTTATTTACACCTGGGACTTTAGTTCAACGTTGAATTCGGATGCTTCGGATAATTCCTCCGGTGGCGGGAACGGAAAACGAAACGTTTGGGTGATTGCTGTGGCGACTTCTTCGGCGGTCTTGGTGGCCGTGGTTGTGAGTGTTGCAGTCTGGGAAATGATGAGGAAGAAAAGAAGGGATAAGGTTGATAAGAGTAATGATGGTGAAGGTGGAGCCAACTTGGTTAAGTTTGATTTGGATAGAGCAACTATACCAAGAAGATTTGATTACAGAGAACTACTTGCAGCCACCAATGGATTCGCAGATGATAGAAAGCTTGGACGAGGAGCTTCGGGACAGGTTTACAAAGGGGTTCTGAGTGATTTGGGGAGGGTTGTTGCGGTGAAAAGGATTTTCGCTAAGTTTGCAAATTCAGAGAGAGTTTTCATCAATGAGAAACTTGGTGCAGTTCGTAGGATGGTGCCACGAGCAAGGTACAAGGTAGCATTAGGAGTGGCTTCAGCAGTTCGTTATCTTCATGAAGATGCGGAGCAGTGTGTTCTTCACAGGGATATTAAGTCAGCAAATGTGTTGTTGGACACAGATTTTAGCACCAAGCTTGGAGATTTTGGAATGGCAAAGTTTGTGGATCCAAGGTTGAGGACACAAATGACAGGGGTGGTGGGGACTTTCGGGTACCTTGCCCCAGAATACATCAACGGACGTAAGGCTAGCAAGGAATCAGACATTTACAGTTTTGGGGTTGTGGCTCTTGAGATCGCATGTGGAAGGAGAACTTACCATGATGGAGAGTTTCATGTGCCTCTGATGAACTGGGTGTGGCAACAGTATGTGAAAGGGAATGTGATGGATGTTGTTGATGAGAGACTGAACAAAGAGTTTAATGTGGATGAAATGAGAAGCTTGATCATTGTGGGATTGTGGTGTACTAACCCCAACGACAAGGAAAGGCCAAAGGCTGCACAAGTGATAAAAGTTCTTGAGTTAGAAGCACCATTGCCAGAGCTTCCACTTGATATGCATGACCGTCTTCCTCCTTCTCTAGTTACATATTCAGAACAACCTAATTTTCAGTCTGTTCAGACACTACCTTTCACCGACAGCTTTATAAGTGTTGGACGTTAA 1857 0.4572 MVTTFVLLLHLRPPFLKTVESLNFNITNFNDPESAQNMAYIGDGKASNGSVELNIVDYLFRVGRALYAKPLHLWDQPSNVLTDFTTHFTFSIDRAKNGTYADGFAFYIAPHGYPIPPNSGGGTFALFNTTSNTFNRHNHVLAVEFDTFNGTIDPPMQHVGIDDNSLVSVTSGKFDIDKNLGKKCNVLITYTSSSKTLFVAWSFNGTATSHSNSSLSYTIDLMEILPEWVDVGFSASTGEFTEHNVIYTWDFSSTLNSDASDNSSGGGNGKRNVWVIAVATSSAVLVAVVVSVAVWEMMRKKRRDKVDKSNDGEGGANLVKFDLDRATIPRRFDYRELLAATNGFADDRKLGRGASGQVYKGVLSDLGRVVAVKRIFAKFANSERVFINEKLGAVRRMVPRARYKVALGVASAVRYLHEDAEQCVLHRDIKSANVLLDTDFSTKLGDFGMAKFVDPRLRTQMTGVVGTFGYLAPEYINGRKASKESDIYSFGVVALEIACGRRTYHDGEFHVPLMNWVWQQYVKGNVMDVVDERLNKEFNVDEMRSLIIVGLWCTNPNDKERPKAAQVIKVLELEAPLPELPLDMHDRLPPSLVTYSEQPNFQSVQTLPFTDSFISVGR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00536 618 FunFam L-type lectin-domain containing receptor kinase IX.1 387 581 - -
Vian7g00536 618 Gene3D - 19 265 - -
Vian7g00536 618 SUPERFAMILY Protein kinase-like (PK-like) 328 603 IPR011009 -
Vian7g00536 618 CDD lectin_legume_LecRK_Arcelin_ConA 22 255 IPR001220 GO:0030246
Vian7g00536 618 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Vian7g00536 618 Gene3D Phosphorylase Kinase; domain 1 320 393 - -
Vian7g00536 618 ProSitePatterns Legume lectins beta-chain signature. 141 147 IPR019825 -
Vian7g00536 618 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 255 IPR013320 -
Vian7g00536 618 Gene3D Transferase(Phosphotransferase) domain 1 394 586 - -
Vian7g00536 618 Pfam Protein kinase domain 403 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00536 618 SMART serkin_6 344 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00536 618 Pfam Legume lectin domain 21 262 IPR001220 GO:0030246
Vian7g00536 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Vian7g00536 618 ProSiteProfiles Protein kinase domain profile. 270 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00536 618 ProSitePatterns Legume lectins alpha-chain signature. 225 234 IPR000985 -
Vian7g00536 618 PANTHER - 401 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00536 Vian-Chr7 12943926 12946191 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00536 1 584 Receptor kinase-like Gene Family AT5G10530 39.590 2.93e-137 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vian7g00536 Lectin_legB 4.8e-65 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00536 - - vra:106763732 1000.35