Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00534 ATGCAAGTTTCGTGTGAATCATCTTCTTCCGTGTCTTCCCTGGAACCTGCAAAGACATATAAGACAAACCTGAACTTGCATCCTCGGACCCAGTATACTGTGTCAGAGAAAACCATGTTAGCTACCTCACAAAATTCCCACCACTCGACAACTTTTCTTCTGCTTATCCTTCCAATAGTCATAGTTCAACCATTCTCCTTCAGTATAACTAACTTTGAAGACTCTGAAAGTGCAGCCCTAGTTGGATACGCAGGCGTAGCTAAGATTGAGAACGGAAGCATACTACTCAACACACTCACCTACAGTGGAGTTGGAAGAGCAATCTATGGCCAACCTCTACACCTCAAAAACTCTTCTAACGAACGAGTCACCGATTTTTCAACTCGTTTTTCATTCACTATCCAATCCCCTAATTCCCTTTACGGTGACGGCTTTGCCTTCTACGTCGCACCTCTTTCCTACCAGATTCCGAAAACCGACAAAACTGGTTACGGTCTCGGCTTATACGGTGAAAACATACCCATAGTTGCTGTCGAATTTGACACTTTTATAAACGACTTAGACCCACCAATTCAGCACGTAGGGATCAACAATGGCTCTGTGGTATCTCTCAATTATACCAAGTTTGATATTGAGAACAACAAAGGGAACATGGGGCATGCGTTGATAACGTACAACGCCTCTGCCAAACTCCTTGCTGTTTCGTGGTTCTTTGATATAAATAGTTCCTCTTCTACGCCTAACGCTTATCTTTCCCACCAGATGGACCTAGCGGAGCTTCTACCAGAGTGGGTCGCTCTTGGTTTTTCAGGATCAACCGGATCGTCCATTGAGGAAAACGTTATCCATTACTGGGAATTCAGTTCTAGTCTGGATCTAACAATTTCCCCACCAAACGAAGAAAATGTCATCACAACAAAATACAAGGGTCGGGGAAAAGTAGTGGTTGGTGCAGTGATTTGCTCTATTATTTTTGCGACAGTGGTTGTTAGTATTACGTGTTGGATGATCAAGAAGACAAGAAAGGAGGATGAATTTGGTTTTGACAGAGAAGCTACGCCTAGAAGGTTTGGTTACAACGAGTTAGTTGCAGCCACGAACGGGTTTGCAGATGATAGAAGAGTTGGAGAAGGTGGGCATGGAGAAGTTTACAAAGGGTTTATGAGTGATTTAGGGCGTGTGGTGGCGGTGAAAAGGATTTGTTCAGACGTGGAAGATTCGGAGAGAATATTCAGAAACGAGGTGAAGATTATAAGCCGGCTTATACATAAAAACCTAGTGCAGTTGATTGGGTGGTGCGAGGAGGAAGGGGAGTTATTGATAGTTATGGAGTACTTAGATAATGGAAGCCTTGAGACTCATCTGTTTGGGAACAGAAGGAGTTTGAAATGGGATGTGAGGTACTGCATAGCATTAGGTGTGGTGAGAGCAATTCGTTATCTTCATGAAGACACGGAGCAGTGTGTTGTTCATAGGAATATTAAGCCTGGTAATGTGTTGTTAGACAGGGATTTCAATGCTAAGCTTAGTGATTTTGGAATGGCGAAGTTGGTGGATCCGAGATTGAGGAGTCAGAAGACAAGGGTGGTGGGGACATATGGATATCTTGCTCCTGAAGGAAGGGCTAGCAAGGAATCAGACATGTACGGTTTTGGGGTGTTGGCTTTGGAAATAGCATGTGGAAGGAGGAGTTACAGGGATGAGGAGTATAATCATGTGCCTTTGATGAATTGGGTGTGGAAACTTTATGTTGATGGGAAGATTTTGAATGCTGCTGATGAGAAATTGAAGAGCGATTTTGATGTGAGTGAAATGAGATGCTTGCTCACTGTGGGGATATGGTGTACCCTAAAGGACCATAAGGAAAGACCAACAGCAGAACAGGTTATTAATGTTCTTAAACAAAAAGTGTCGTTGCCAGTGCTTTCTACTAAACATGCATGA 1944 0.4331 MQVSCESSSSVSSLEPAKTYKTNLNLHPRTQYTVSEKTMLATSQNSHHSTTFLLLILPIVIVQPFSFSITNFEDSESAALVGYAGVAKIENGSILLNTLTYSGVGRAIYGQPLHLKNSSNERVTDFSTRFSFTIQSPNSLYGDGFAFYVAPLSYQIPKTDKTGYGLGLYGENIPIVAVEFDTFINDLDPPIQHVGINNGSVVSLNYTKFDIENNKGNMGHALITYNASAKLLAVSWFFDINSSSSTPNAYLSHQMDLAELLPEWVALGFSGSTGSSIEENVIHYWEFSSSLDLTISPPNEENVITTKYKGRGKVVVGAVICSIIFATVVVSITCWMIKKTRKEDEFGFDREATPRRFGYNELVAATNGFADDRRVGEGGHGEVYKGFMSDLGRVVAVKRICSDVEDSERIFRNEVKIISRLIHKNLVQLIGWCEEEGELLIVMEYLDNGSLETHLFGNRRSLKWDVRYCIALGVVRAIRYLHEDTEQCVVHRNIKPGNVLLDRDFNAKLSDFGMAKLVDPRLRSQKTRVVGTYGYLAPEGRASKESDMYGFGVLALEIACGRRSYRDEEYNHVPLMNWVWKLYVDGKILNAADEKLKSDFDVSEMRCLLTVGIWCTLKDHKERPTAEQVINVLKQKVSLPVLSTKHA 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00534 647 CDD lectin_legume_LecRK_Arcelin_ConA 65 291 IPR001220 GO:0030246
Vian7g00534 647 FunFam L-type lectin-domain containing receptor kinase IX.1 354 445 - -
Vian7g00534 647 Gene3D - 63 301 - -
Vian7g00534 647 ProSitePatterns Legume lectins alpha-chain signature. 261 270 IPR000985 -
Vian7g00534 647 Gene3D Transferase(Phosphotransferase) domain 1 446 646 - -
Vian7g00534 647 FunFam L-type lectin-domain containing receptor kinase IX.1 446 643 - -
Vian7g00534 647 ProSitePatterns Legume lectins beta-chain signature. 176 182 IPR019825 -
Vian7g00534 647 Gene3D Phosphorylase Kinase; domain 1 354 445 - -
Vian7g00534 647 Pfam Protein kinase domain 370 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00534 647 SUPERFAMILY Concanavalin A-like lectins/glucanases 63 292 IPR013320 -
Vian7g00534 647 SUPERFAMILY Protein kinase-like (PK-like) 353 633 IPR011009 -
Vian7g00534 647 Pfam Legume lectin domain 66 292 IPR001220 GO:0030246
Vian7g00534 647 PANTHER - 84 635 - -
Vian7g00534 647 ProSiteProfiles Protein kinase domain profile. 369 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00534 647 ProSitePatterns Protein kinases ATP-binding region signature. 375 398 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00534 Vian-Chr7 12917837 12919780 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00534 54 645 Receptor kinase-like Gene Family AT5G10530 42.332 4.98e-154 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vian7g00534 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00534 - - vum:124841915 1248.8