Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00533 ATGGCGTACATGGGTGACGGCAAAACAAGGAACGGTTCCGTAGACCTTAACATAGTCTCATATTTTTTCCGTGTCGGGAGAGCCTTGTCTGCACAACCTTTGCACCTTTGGGATTCCTCTTCAAGAGTTGTAACAGACTTTACCACACGCTTCACCTTTTCTATTGAAAAAGGAAACGATCAAACAGGTTCCTACGCTGACGGTTTCGCCTTCTATATAGCCCCTCAAGGCTATCAGATTCCTCCAAACGGCGCAGGTGGCACTTTTGGCCTTTTCAATGGCACTTTCAATAGCTTACTTCCCCAAAATCGCATTCTCGCTGTTGAGTTTGACACATTTAACGGTTCGATTGACCCTCCCATGCAGCACGTTGGCATAGACGATAACTCTCTCAGATCTGCGACTTCTGGAAAGTTTGACATCGACGAAAATCTGGGGAAGAAATGTAACGCTTTGGTAACCTACACTGCTTCTAACAAGACCCTTTTTGTGGCTTGGTCCTTCAACGAAACTGCAACGCGATTATCCAATTCTTCACTTTCTTACCAGATTGACCTCTTGGGAATTCTCCCCGAGTGGGTTGATGTTGGGTTCTCTGCTTCCACCGGCGAACTCACCGAACGAAACTTCATTCACTCGTGGGAGTTCAGTTCCACGCTGAATTCTTCCACCGCTTCGAAAGATAACCCCTCCGGTGGAAATGAGAAGAGCGGGAAAGCGTTGAGCATGGCTATGGTGGTTGTTGTGGTGGCGTGTTCAATGATTTTGGTGGCCGTGGCAGCAAATGTTGCAGCTTGGATAGTAATCATGAAGAAGAGAAGGGTTAAGGGGGATTGTGGTTATGATGATAGTGGTAAAGGTCGTTCGGCTAGGTTCGATTTGGACAGGGAAAGTATACCGAGAAGGTTTGATTACACAGAACTAGTTGAAGCCACCAAAGGGTTTGCGGATGAAACAAGGCTTGGAAGAGGAGCTTCGGGACAGGTTTACAAAGGGGTTCTGAGCTATTTAGGAAGGGTTGTTGCTGTGAAAAGAATTTTCACTAACTTTGAAAATTCAGAGAGGGTTTTCATCAACGAGGTTAAGATCATAAGCCGTCTTATACACAGAAACTTGGTGCAGTTCGTAGGGTGGTGCCACGAGCAAGGTGAGTTTCTGTTGGTTTTTGAGTACATGCCTAATGGAAGCCTCGACACTCATCTCTTTGGCGACAAGAAAACTTTGACCTGGGATATTAGGTACAAGGTAGCGCTGGGCGTGGCTTTGGCCCTTCGTTATCTCCATGAGGATGCGGAGCAGAGTGTTCTTCACAGGGATATTAAGTCGGCGAATGTGTTGTTGGACACGGATTTTAGCACGAAACTTGGAGATTTTGGGATGGCAAAGTTGATGGATCCAAGGTTTAAAACTCAGAGGACAGGGGTGGTGGGGACTTACGGGTACCTTGCCCCCGAATACCTGAACGGAGGTAGGGCTAGCAAGGAATCAGACATGTATAGTTTTGGGGTTGTGGCTCTTGAGCTTGCATGTGGAAGGAGGACTTACCCTGATGGAGAGTTTCATGTGCCTCTGATGAACTGGGTGTGGCAACAGTATGTGGAAGGGAATGTGATGGAGGTTGTTGATGAGAGATTGGAGAAGGAGTTTGATGTGGATAAAATGAGAAGCTTGATCATTGTGGGATTGTGGTGTACTAACCCTAACGACAAGGAAAGGCCAAAGGCTGCACAAGTGATAAAAGTTCTTGGGCTAGAAGCGCCATTGCCAGAGCTTCCACTTGATATGCATGATCGTCCTCCTCTCTCTCTAAGTACTTACACGCATGCACAACCCAATTGTAATTCCTTACAATCTCTACCCTTCACTAACAGCTTTGTCAGTACTGGACGTTAA 1893 0.4659 MAYMGDGKTRNGSVDLNIVSYFFRVGRALSAQPLHLWDSSSRVVTDFTTRFTFSIEKGNDQTGSYADGFAFYIAPQGYQIPPNGAGGTFGLFNGTFNSLLPQNRILAVEFDTFNGSIDPPMQHVGIDDNSLRSATSGKFDIDENLGKKCNALVTYTASNKTLFVAWSFNETATRLSNSSLSYQIDLLGILPEWVDVGFSASTGELTERNFIHSWEFSSTLNSSTASKDNPSGGNEKSGKALSMAMVVVVVACSMILVAVAANVAAWIVIMKKRRVKGDCGYDDSGKGRSARFDLDRESIPRRFDYTELVEATKGFADETRLGRGASGQVYKGVLSYLGRVVAVKRIFTNFENSERVFINEVKIISRLIHRNLVQFVGWCHEQGEFLLVFEYMPNGSLDTHLFGDKKTLTWDIRYKVALGVALALRYLHEDAEQSVLHRDIKSANVLLDTDFSTKLGDFGMAKLMDPRFKTQRTGVVGTYGYLAPEYLNGGRASKESDMYSFGVVALELACGRRTYPDGEFHVPLMNWVWQQYVEGNVMEVVDERLEKEFDVDKMRSLIIVGLWCTNPNDKERPKAAQVIKVLGLEAPLPELPLDMHDRPPLSLSTYTHAQPNCNSLQSLPFTNSFVSTGR 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00533 630 CDD lectin_legume_LecRK_Arcelin_ConA 9 220 IPR001220 GO:0030246
Vian7g00533 630 ProSiteProfiles Protein kinase domain profile. 315 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00533 630 FunFam L-type lectin-domain containing receptor kinase IX.1 392 592 - -
Vian7g00533 630 FunFam L-type lectin-domain containing receptor kinase IX.1 300 391 - -
Vian7g00533 630 PANTHER - 24 586 - -
Vian7g00533 630 ProSitePatterns Legume lectins alpha-chain signature. 190 199 IPR000985 -
Vian7g00533 630 Pfam Protein kinase domain 316 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00533 630 SUPERFAMILY Protein kinase-like (PK-like) 298 606 IPR011009 -
Vian7g00533 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Vian7g00533 630 Gene3D Phosphorylase Kinase; domain 1 300 391 - -
Vian7g00533 630 Gene3D Transferase(Phosphotransferase) domain 1 392 596 - -
Vian7g00533 630 ProSitePatterns Protein kinases ATP-binding region signature. 321 344 IPR017441 GO:0005524
Vian7g00533 630 Gene3D - 1 232 - -
Vian7g00533 630 SMART serkin_6 315 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00533 630 Pfam Legume lectin domain 3 228 IPR001220 GO:0030246
Vian7g00533 630 SUPERFAMILY Concanavalin A-like lectins/glucanases 4 220 IPR013320 -
Vian7g00533 630 ProSitePatterns Legume lectins beta-chain signature. 106 112 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00533 Vian-Chr7 12906396 12908381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00533 1 595 Receptor kinase-like Gene Family AT5G10530 44.298 7.83e-168 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vian7g00533 Pkinase 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00533 - - gmx:100305427 978.008