Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00525 ATGGCTGTATTTTCTTCAGTTTCTTCTTCTCTTTTGCTCACCTTCTTCCTCCTCTTCGGTCTCTCTGTAGCTAGGGAAATACTGGTTGGAGGTAAGACTGATGCTTGGAGGGTTCCAGCCTCTGAATCAGGCGCACTTAACCAATGGGCCGAAAGGTCTCGGTTCCAAGTTGGCGACTTTCTCGTTTGGAAATATGATGGTGGGAAAGACTCAGTTTTGCAAGTGAGCAGAGAGGAGTATGTAAACTGCAGCATCTCAAACCCTATAAAGGTGTACAGTGATGGAACGACGAAGGTGAAGCTTGACCGTCCTGGGCCATTCTACTTCATCAGTGGGGCAAAGGGTCACTGTGAGAAGGGTCAGAAGCTTGTGGTGGTGGTTTTGACTCCAAGGGGAAGGTCCAGTGGCATTGTTTCTTCACCAGCACCTGCTCCTGCACCTTCTCTTGCTGAGTTTGATGGTCCTGCTGTTGCGCCTACTAGCAGTGCCAATGCTTTGCATGGGGGCATTGTCATGGTGGCTCTGGTTGCTATGTGGGGAATTTTTATGTAA 552 0.4909 MAVFSSVSSSLLLTFFLLFGLSVAREILVGGKTDAWRVPASESGALNQWAERSRFQVGDFLVWKYDGGKDSVLQVSREEYVNCSISNPIKVYSDGTTKVKLDRPGPFYFISGAKGHCEKGQKLVVVVLTPRGRSSGIVSSPAPAPAPSLAEFDGPAVAPTSSANALHGGIVMVALVAMWGIFM 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00525 183 FunFam Early nodulin-like protein 1 24 132 - -
Vian7g00525 183 CDD OsENODL1_like 25 128 IPR041846 -
Vian7g00525 183 Gene3D - 23 131 IPR008972 -
Vian7g00525 183 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Vian7g00525 183 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Vian7g00525 183 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Vian7g00525 183 PANTHER BLUE COPPER PROTEIN 26 146 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00525 Vian-Chr7 12817190 12818145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00525 8 183 Phytocyanin Superfamily AT4G31840 51.366 7.28e-62 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00525 - - gmx:100527857 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00525 7 12817190 12818145 Vian7g00525 7 12817190 12818145 ECH
Vian7g00525 7 12817190 12818145 Vian4g02048 4 37298821 37299638 PCT