Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00517 ATGGCATTGTTCCGCAAGTTCTTCTATAAGAAGCCCCCAGATGGGCTTCTAGAAATCACTGAAAGGGTTTATGGAATCTATGTCATTCATATGTGTGATTGTGATTATTGTGTCATTGCACGTGTAGTCTTTGATTACTGCTTTACCACGGATGTTATGGAAGAAGAAGAATATAGAGTGTATCTAGGAGGAATAATTGGGCAACTTCGTGGTCACTTCCCTGATGCTTCATTTATGGTGTTCAACATGAGGGAGGGAGACTGCCAAAGCCAGATTTCAAACATTTTGTGTGACTACGATATGACTGTGATAGACTATCCTCGACAGTATGAAGGGTGCCCATTGCTTACCATGGAGATGATCCATCATTTCTTGAGATCAGGTGAAAACTGGCTTGAACTTGGGCATCACAATGTTGTCTTGATGCATTGTGAACGAGGTGGGTGGCCGTTATTAGCATTTATGCTGGCTGCACTCTTGATTTATAGAAAGATGTTTACAGGGGAGCAAAAAACACTAGACATGATATACAAGCAAGCTCCTCGGGAACTTCTGCAGTTGATGTCACCATTGAATCCTTTAGCTTCACAATTGAGATATCTTCAGTACATATCAAGAAGAAATGTTGGTTCAGAATGGCCTCCTCTTGATAGGGCACTTACTTTGGACTGTGTAATTATAAGACTCATTCCTAACATGGGTGGAGAGGGTGGCTGCCGTCCTATATTTAGAATATATGGGCAAGACCCTTTTATTCCTGCAGATCGAACTCCCAAAGTTCTCTTCTCAACTCCAAAAAGGAGCAAACTTGTTCGCTACTGTAGGCAGACTGACTGTGAACTGGTTAAGATTGACATCCACTGTCATGTTCAAGGTGATGTTGTTTTTGAGTGTATTCATCTGTACAGTGATTTAGAGCATGAAGAAATGATGTTTCGGGTGATGTTTAATACAGCATTCATAAGATCAAATATTTTGATGCTTAACCGTGATGAAATTGACATACTATGGAATGCTAAAGATTGCTTCCCTAAGAATTTTAGAGTGGAGGTTCTTTTCTCAGATATGGATGCTTCAACTTCTGTTATTTCAATTGATCTGCCTCGTGTTGAGGAGAAAGATGGCCTCCCTGTTGAAGCATTTGCGAAGGTCAAGGAGATTTTCAGCAATGTGGATTGGCTAGATTCAAAGGAAGAAGTAGCAAGTGTGCTCCAACAGATCACATCTTCAAATATGCTTCTGGAAAGATTAGACTCTGGGGTTTCTGCTGCAACAAGTGACTTGCAAAAGGAGTCATCTGAAAAGTCTTCAGCTGTTTTGAAGGCATACAGTGATACAAACATTCAAACTTCTGCAGTTCAGGGGAAACATTCTACATCCTCATTAGGATCGTCTTTGGATTTAGCTATGGGAAATAAGACTGAACCATTAGAGTCAAAGACATTGTCCAAAAATGACATTGAGACTCTTGAATGTTCAGGTCAAGGGAACCAACCTATTCACTCATTTGGGCTCTCAAAAGATTCAGATTCTACTAAAAGGGGGACTGAGTCATTAGAATCCAAGGAGAAGGATATTGAGTCATTAGCATCCACTGATGCAGATTCATTGGCAAAGAAGATTGATTTATTAGGATCAAAGGAGAAAACATTTGAGTCACTCAACTCCGAGGCATTTTTGGAAAATGATAGCAGATTCAAATATGAACCTAGGCCGCTTGCAGAAGTTGATAACTCATCTGGTAGTGCTCCTATGGAAAAGAATAATGACCCTCTAGAATTAAAGGTATCACCAGAAAATACCCTCAAGACTTCTGCTTCCACGAGTCAGGGAAAACAGCTTACTCCCTCATTTGGACTCATAACAGATTCTAGTTCTCCTGAAAAGCCAGTTGAATCATTAGACAATGCCAAGGTTACAACATCTATGCCTCATGTGGAGAAGTCTATGCCCTCAATTGAACCATATAAGGATGCATATTCAATGACACATGACATGGGACCATTAGAAACAAAGTCATTAACGGATGGAAATTCAATAAAAGAGAAAATGGGGCAATTAGAGCAAATGGTATTGTCAGAAAATGATACCAAGAGTGTCACATCCACAGCTCAGGGGAAACAATATAGTCCTTTACTTGAACAGCCCGTTGAAGCAAGCACAATTAAAACGAAAATTGAACCTCATGAATTGCAGGTTTCCCTCCAGCTTCCCACTCAATCAAAAATAATTTCTTCACCGGTGCGTCCAGCTGTCCGATCTGCTTCTGCTTCCACTTCTTATTTTAACTCCTTAAAAGGTTCACCTGTAGCTATCTCAAGATATCGTAGTGCACCATCAGCTCTTGGAATAACATCTGTGTTGCAGGATCATGCAGCAGTGGATATCAAAGAAGTAACTCATCCAGTGACAGTATCTCCTCCAGCTTCTGTGTTGCCTCCTTCAGACTCCAAGGTGTTAAATTCTGTAGAGCCTAGTCCCACAGCTATTCCTCCAGCATCATCATCGCCTTTGCTTCCATCTTTACCTTTAAAAACTTCAGTTGATGCTCTTAAAACCACGGAAAAAACTTTTGAATCCCTTTCTCCTGCAGCTGTAACTACACCACCACCACCACCACCACCATCTTCTCAATGCGATCACACTTCAAATTTGATGCAATCTAATGCTACTCAGTACCCTGAGAATACAAATGAGGGTAAGAAACCATTGGTTGGTCCTCCTCCTCCTCCCCCATCCCCTTCAATGCTCGCTCCTCCAATCCCATCATTTTCTCCAGCCCCTTCCCTTCCTGAAACATCACTTTCCACAACCCAAGATTCATGTAAAGGTCCTCCTGCACCGCCACCTCCACCTGCGCTGTCTGGGTTTCCTTCTTCATTGGGTATAAATGAATCAGTTGCTATACCTGGCCCTCCTCCTCCTCCCCCGCCTCCACCTCCTAGCCTTTCAAGTTCTGCACCACCATTAGCACCACCACCACCACCATTAGCACCACCACCACCACCATTAGCACCACCACCACCACCACCCCCTCCTTCCGCTTCTGCATTCCAAAATTCTTTGTCTGAGAATGGTCCTCCTGTACCCCCACCTCCACCTCCTAGCCTTTCTGGTTCAACAATATCACCTTCAGCGCCACCACCACCTCCTCCTCCAGGTTCTGCGTCCCAAAATTCTTTGTCTAGCTCCACAAATGTTCCACCTGTACCCCCACCTCCCCTTTCTGCCAATGGATTGTCAAAACCTGGAGTTCCTGGACCACCTTCTGTTCCTGGACCACCTTCTGCTCCTGGACCACCTTCTGCTCCTTTTGGTGAAAAGGGTCGTGGCCTGATGCGAGCTAATGCAAAATTTCAGTCTAGGAGGAGCAATCTGAAACCTTACCATTGGCTAAAATTAACAAGGGCGATGCAAGGAAGCTTATGGGCTGAGACACAGAAACTAGATGAATTTTGTAGGGCTCCAGAGTTTGACATGTCAGAACTTGAAACTTTGTTCTCCGCAGCTTCCCCAGCTGCTAATGATGGAAAAGGAGGAAAGTTAAATCGCCGTGCCTCTGGGCAAAAAGTTGAGAAAGTTCAACTGAAGGTTCACGTTACATTGCAGATTGAGCTCAGGCGGGCCTATAACTGTGAGATCATGCTTACAAAAGTCAAAATTCCTTTGCCTGACTTGATGTCTCACATTCCAGTCATTGTCTTTCAGAGTGCTGTGCTTGCAATGGATGATACAGTATTAGACATTGATCAACTTGATAACCTCATAAAATTCTCTCCAACCAAAGAAGAGATGGAAACACTCAAGAACTATGCCGGGAATAAGGACAACTTGGGAAAGTGTGAGCAGGTTTCAGAGCTTAAAAGAGATTTGAATATTGTGAATTCTGCATCTGAAGAGGTGCTTGCTGAAAAACTAGGAGAACTTCTCGATTTCCATAAAGACCTAATACAATTAAAATACTTGGCAGAGGAAATGCAAGCTATCAGTAAAGGACTGGAGAAAGTAGTTCAGGAATTGACTGCATCAGAGAATGATGGACCTGTGTCAGAATACTTCTGCCAGGGTAGAAATGCAGATGCATTGGCTTTATACTTTGGTGAAGATCCAGCACGTTGTCCATTTGAACAAGTTGTATCTACGCTGCTCAACTTTGTGAGGTTGTTCGTCAAAGCACATGAAGAAAATTGCAAGCAGATTGAACTAGAGAGAAAAAGAGCAGAGAAGGAAGCAGAGAATGAGAAGTTGAAGCTAGCTGCTGCCAAGAAGGAGTCTGAACAGATGATGAGGACCACTATAAAGAGTGGGGATATTAAATGA 4320 0.4282 MALFRKFFYKKPPDGLLEITERVYGIYVIHMCDCDYCVIARVVFDYCFTTDVMEEEEYRVYLGGIIGQLRGHFPDASFMVFNMREGDCQSQISNILCDYDMTVIDYPRQYEGCPLLTMEMIHHFLRSGENWLELGHHNVVLMHCERGGWPLLAFMLAALLIYRKMFTGEQKTLDMIYKQAPRELLQLMSPLNPLASQLRYLQYISRRNVGSEWPPLDRALTLDCVIIRLIPNMGGEGGCRPIFRIYGQDPFIPADRTPKVLFSTPKRSKLVRYCRQTDCELVKIDIHCHVQGDVVFECIHLYSDLEHEEMMFRVMFNTAFIRSNILMLNRDEIDILWNAKDCFPKNFRVEVLFSDMDASTSVISIDLPRVEEKDGLPVEAFAKVKEIFSNVDWLDSKEEVASVLQQITSSNMLLERLDSGVSAATSDLQKESSEKSSAVLKAYSDTNIQTSAVQGKHSTSSLGSSLDLAMGNKTEPLESKTLSKNDIETLECSGQGNQPIHSFGLSKDSDSTKRGTESLESKEKDIESLASTDADSLAKKIDLLGSKEKTFESLNSEAFLENDSRFKYEPRPLAEVDNSSGSAPMEKNNDPLELKVSPENTLKTSASTSQGKQLTPSFGLITDSSSPEKPVESLDNAKVTTSMPHVEKSMPSIEPYKDAYSMTHDMGPLETKSLTDGNSIKEKMGQLEQMVLSENDTKSVTSTAQGKQYSPLLEQPVEASTIKTKIEPHELQVSLQLPTQSKIISSPVRPAVRSASASTSYFNSLKGSPVAISRYRSAPSALGITSVLQDHAAVDIKEVTHPVTVSPPASVLPPSDSKVLNSVEPSPTAIPPASSSPLLPSLPLKTSVDALKTTEKTFESLSPAAVTTPPPPPPPSSQCDHTSNLMQSNATQYPENTNEGKKPLVGPPPPPPSPSMLAPPIPSFSPAPSLPETSLSTTQDSCKGPPAPPPPPALSGFPSSLGINESVAIPGPPPPPPPPPPSLSSSAPPLAPPPPPLAPPPPPLAPPPPPPPPSASAFQNSLSENGPPVPPPPPPSLSGSTISPSAPPPPPPPGSASQNSLSSSTNVPPVPPPPLSANGLSKPGVPGPPSVPGPPSAPGPPSAPFGEKGRGLMRANAKFQSRRSNLKPYHWLKLTRAMQGSLWAETQKLDEFCRAPEFDMSELETLFSAASPAANDGKGGKLNRRASGQKVEKVQLKVHVTLQIELRRAYNCEIMLTKVKIPLPDLMSHIPVIVFQSAVLAMDDTVLDIDQLDNLIKFSPTKEEMETLKNYAGNKDNLGKCEQVSELKRDLNIVNSASEEVLAEKLGELLDFHKDLIQLKYLAEEMQAISKGLEKVVQELTASENDGPVSEYFCQGRNADALALYFGEDPARCPFEQVVSTLLNFVRLFVKAHEENCKQIELERKRAEKEAENEKLKLAAAKKESEQMMRTTIKSGDIK 1439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00517 1439 Pfam Formin Homology 2 Domain 1123 1283 IPR015425 -
Vian7g00517 1439 SMART PTEN_C2_2 215 355 IPR014020 -
Vian7g00517 1439 MobiDBLite consensus disorder prediction 507 530 - -
Vian7g00517 1439 MobiDBLite consensus disorder prediction 903 927 - -
Vian7g00517 1439 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1204 1415 - -
Vian7g00517 1439 MobiDBLite consensus disorder prediction 1025 1056 - -
Vian7g00517 1439 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 92 205 IPR029021 -
Vian7g00517 1439 MobiDBLite consensus disorder prediction 1418 1439 - -
Vian7g00517 1439 Gene3D Protein tyrosine phosphatase superfamily 16 209 IPR029021 -
Vian7g00517 1439 ProSiteProfiles C2 tensin-type domain profile. 217 356 IPR014020 -
Vian7g00517 1439 MobiDBLite consensus disorder prediction 491 530 - -
Vian7g00517 1439 Pfam C2 domain of PTEN tumour-suppressor protein 218 354 IPR014020 -
Vian7g00517 1439 MobiDBLite consensus disorder prediction 815 829 - -
Vian7g00517 1439 MobiDBLite consensus disorder prediction 879 898 - -
Vian7g00517 1439 Gene3D - 214 359 - -
Vian7g00517 1439 MobiDBLite consensus disorder prediction 491 506 - -
Vian7g00517 1439 MobiDBLite consensus disorder prediction 574 653 - -
Vian7g00517 1439 PANTHER FORMIN-J 1 608 - -
Vian7g00517 1439 Coils Coil 1390 1431 - -
Vian7g00517 1439 MobiDBLite consensus disorder prediction 804 841 - -
Vian7g00517 1439 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1116 1439 IPR015425 -
Vian7g00517 1439 MobiDBLite consensus disorder prediction 928 942 - -
Vian7g00517 1439 MobiDBLite consensus disorder prediction 968 1016 - -
Vian7g00517 1439 Gene3D Formin, FH2 domain 1293 1424 IPR042201 -
Vian7g00517 1439 MobiDBLite consensus disorder prediction 594 647 - -
Vian7g00517 1439 Gene3D Formin, FH2 domain 1112 1289 IPR042201 -
Vian7g00517 1439 MobiDBLite consensus disorder prediction 1066 1102 - -
Vian7g00517 1439 MobiDBLite consensus disorder prediction 859 1109 - -
Vian7g00517 1439 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 219 356 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00517 Vian-Chr7 12713324 12736545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00517 682 845 FH2 protein (formin) Gene Family AT2G25050 31.217 2.17e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00517 - - vum:124835422 2220.28