Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00509 ATGGATTTTCAACTGCTTCGTGTTGGTCTCCCTCTGCTTGGGTGCGAGGTGTCTGTCTTAAACTTCAACGTCAGCTTCGAATTCTCTCTGTTTGATCCGTGGATTTTCTCCGTTAAACCTTTCATCTCTCACCAAGAAAAGGTCCTTGACCTTTATGCTAATGAGTTTCTTGATCCCTCTAAACGCTCATTTAAACGAGGCCAAATTGCTGGCATATTCTATGGCGTTTCCCAGTTCTTTATTTTCCAATCTTATGGTCTTGCCTTGTGGTATGGATCTACTTTGATGGAAAAGGAGCTTGCAAGCTTTAAATCAATTATGAAGTCATTTATGGTTTTGATAGTAACAGCTCTGGCTATGGCGGAGACTTTGGCCCTTGCCCCAGACCTTTTGAAAGGGAACCAAATGGTTGCATCAGTTTTCGAAGTGATGGATAGAAAGTCAGGAATAACAGGAGATGTTGGAGAGGAATTGAAAACAGTGGAGGGAACAATTGAGCTCAAAAGAGTCAATTTCAGCTACCCTTCAAGGCCAGATGTGATTATTTTCAAGGATTTCAACCTAAGAGTTCCTGCAGGCAAGAGTGTTGCTCTAGTGGGGCAAAGTGGTTCTGGTAAAAGCTCTGTGATTTCCCTTATCCTCAGATTTTGTGATCCAGTATCCGGAAGGGTGTTAGTTGATGAGCCAGCTCTTTTTGCCACATCAATTTATGAAAACATACTCTATGGAAAAGAAGGTGCCTCTGATTCAGAAGTGATTGAAGCAGCTAAGCTTGCCAATGCTCATAACTTCATCAGTGGTCTTCCTAAGGGCTACTCCACCAAAAGTGTTTTTGGGACTGATTCACATACAACAATGATTGATTGGCTTGGAGTTGCTGGATGGGGTGTTGGGGGTATTGAAGCAGAGGTAGCAATGCTTGGCCAAGAGATATTTCCTTGGGGAATGGCTGAATGTGGTCTCCAACTTGGAGGACTCAATGTTATTGCTGCATTTACCCAACAAACATGGGGTTAA 1017 0.4287 MDFQLLRVGLPLLGCEVSVLNFNVSFEFSLFDPWIFSVKPFISHQEKVLDLYANEFLDPSKRSFKRGQIAGIFYGVSQFFIFQSYGLALWYGSTLMEKELASFKSIMKSFMVLIVTALAMAETLALAPDLLKGNQMVASVFEVMDRKSGITGDVGEELKTVEGTIELKRVNFSYPSRPDVIIFKDFNLRVPAGKSVALVGQSGSGKSSVISLILRFCDPVSGRVLVDEPALFATSIYENILYGKEGASDSEVIEAAKLANAHNFISGLPKGYSTKSVFGTDSHTTMIDWLGVAGWGVGGIEAEVAMLGQEIFPWGMAECGLQLGGLNVIAAFTQQTWG 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00509 338 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 43 274 IPR039421 -
Vian7g00509 338 Gene3D - 228 272 IPR027417 -
Vian7g00509 338 Gene3D - 163 227 IPR027417 -
Vian7g00509 338 Pfam Aconitase family (aconitate hydratase) 272 311 IPR001030 -
Vian7g00509 338 Pfam ABC transporter transmembrane region 44 118 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vian7g00509 338 Pfam ABC transporter 184 229 IPR003439 GO:0005524
Vian7g00509 338 SUPERFAMILY Aconitase iron-sulfur domain 276 312 IPR036008 -
Vian7g00509 338 Gene3D ABC transporter type 1, transmembrane domain 43 162 IPR036640 GO:0005524|GO:0016020
Vian7g00509 338 Gene3D Aconitase, domain 3 273 318 IPR015931 -
Vian7g00509 338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 274 IPR027417 -
Vian7g00509 338 SUPERFAMILY ABC transporter transmembrane region 43 146 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00509 Vian-Chr7 12490201 12492329 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00509 52 275 Calmodulin-binding Proteins AT2G36910 41.296 6.00e-49 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00509 K05658 - gmx:100810688 398.667