Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00506 ATGATAACTTGGAACCTGTTGCACGCAAGAATAAGTTGGACACACGCAATAGCGCTATTATTTCTTCATTTTTTGTTGTTGGTCAAAGAAATAGTACCTGGGAGCCCTGAATATTCAAGCTGTGATATGGGGTACCTCAATTCAGTCTTATCCTCTTCAGGCCAGGTTCATGCCACAGAAGATTCACCTGTCAGCGGAGGGGGCCTCAGTCAGAATGGCAAATTCAGCTATGGGTATGCTAGCTCCCCTGGCAAGAGATCATCAATGGAAGATTTTTATGAGACAAAAATTGATGGCGTTGATGGTGAAATTGTTGGCCTTTTTGGAGTTTTTGATGGTCATGGAGGTGCTCGTGCTGCCGAGTATGTCAAGCAAAACCTGTTTAGCAATTTGATCAGACATCCAAAATTCATTTCTGACACCAAATCTGCTATAGCTGATGCATATAACCATACCGACTCTGAATTTCTGAAATCTGAAAATAATCAAAACAGAGATGCTGGATCAACTGCTTCCACAGCCATTCTTGTCGGAGATCGATTGCTTGTTGCAAATGTTGGGGATTCCAGAGCTGTTATATGCAGGGGTGGAAATGCCATTGCTGTTTCCCGAGATCACAAGCCGGACCAAACTGATGAGAGACGAAGGATTGAAGATGCAGGTGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGCGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAAGGTTGATAGCTCTCTTGAGTTTCTCATATTGGCCAGTGATGGGCTATGGGATGTTGTCTCAAATGAGGAAGCTGTTTCCATGATTAAACCGATTCAGGACGCGGAGGAGGCAGCAAAGAGACTGATGCAAGAAGCATACCAGAGAGGTAGTTCTGACAACATTACATGCGTGGTTGTTCGTTTCTTGTCGAATCAAGGTGCTTCTTCTCACAGTAACTCTGGCTAA 1008 0.4425 MITWNLLHARISWTHAIALLFLHFLLLVKEIVPGSPEYSSCDMGYLNSVLSSSGQVHATEDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETKIDGVDGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIRHPKFISDTKSAIADAYNHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERRRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVSMIKPIQDAEEAAKRLMQEAYQRGSSDNITCVVVRFLSNQGASSHSNSG 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00506 335 Gene3D - 68 328 IPR036457 -
Vian7g00506 335 SMART PP2C_4 66 320 IPR001932 -
Vian7g00506 335 SMART PP2C_SIG_2 71 322 IPR001932 -
Vian7g00506 335 SUPERFAMILY PP2C-like 70 322 IPR036457 -
Vian7g00506 335 CDD PP2Cc 75 322 IPR001932 -
Vian7g00506 335 PANTHER PROTEIN PHOSPHATASE 64 321 IPR015655 GO:0004722|GO:0006470
Vian7g00506 335 ProSitePatterns PPM-type phosphatase domain signature. 107 115 IPR000222 GO:0043169
Vian7g00506 335 FunFam probable protein phosphatase 2C 59 68 326 - -
Vian7g00506 335 ProSiteProfiles PPM-type phosphatase domain profile. 76 322 IPR001932 -
Vian7g00506 335 Pfam Protein phosphatase 2C 105 315 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00506 Vian-Chr7 12436677 12440727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00506 43 334 PP2C-type Phosphatase Gene Family AT4G31750 90.411 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00506 K17506 - gmx:100795017 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00506 7 12436677 12440727 Vian7g00506 7 12436677 12440727 ECH
Vian4g02114 4 37996935 38000207 Vian7g00506 7 12436677 12440727 ECH