Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00495 ATGGTGAAACCGGCCATTACCAGAGTTGATTCTTCTTCTTCTTCCTCTTCTTCTCCCACTTCTTGCAATGACTCATTCTCCACCAACAATTCCAGTGCCGCCTGTAAGATGTACAAAGGAGTGAGGAAGAGAAAATGGGGGAAATGGGTGTCTGAAATTCGGCTTCCAAACAGCCGTGAGCGTATATGGTTGGGCTCTTACGACACGCAAGTGAAGGCAGCAAGAGCCTTTGATGCTGCTCTCTATTGCCTGCGTGGGAAGGGTGCCAGTTTCAACTTCCCCGACACGCCTCATCTCTTCGAAATGGAGTCGCTCAAGATACCCTGCAGCCACCAAGAGATCCAGGAGGTGGCGGCCAAGTTTGCGAACAAGGTGGTGGAGATTTTGGCAGAAGAAGAAGAAGAAGATGGAGAAGTTGGAGTTCAGAGTGAGTCTATGTCTGACCACACCACACACACAGAAACAAACACGACCTTTCCTATTTATGATGGTGGGACAAACAATGATGTTCGAGTGGACCAAGACACCATGGATTGGACATTTATGAACATGTTGGATGACTTGAATGGCTCCGATTTTGGCCTCTATTTTGAAGCAGAGAAGGGTGAGTTTTTGTGCCCCACAACACACACTCCACTACTCTTTCACAATGGAGATGAGATTGAAGTTGATGATCATGATCATGATGCTTTTTCTAACCACTCTTTTCTTTGGAGTTGGAACTTTTGA 729 0.465 MVKPAITRVDSSSSSSSSPTSCNDSFSTNNSSAACKMYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTQVKAARAFDAALYCLRGKGASFNFPDTPHLFEMESLKIPCSHQEIQEVAAKFANKVVEILAEEEEEDGEVGVQSESMSDHTTHTETNTTFPIYDGGTNNDVRVDQDTMDWTFMNMLDDLNGSDFGLYFEAEKGEFLCPTTHTPLLFHNGDEIEVDDHDHDAFSNHSFLWSWNF 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00495 242 CDD AP2 38 96 IPR001471 GO:0003700|GO:0006355
Vian7g00495 242 MobiDBLite consensus disorder prediction 132 162 - -
Vian7g00495 242 Pfam AP2 domain 38 86 IPR001471 GO:0003700|GO:0006355
Vian7g00495 242 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Vian7g00495 242 FunFam Ethylene-responsive transcription factor 2 36 95 - -
Vian7g00495 242 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Vian7g00495 242 PRINTS Ethylene responsive element binding protein signature 60 76 IPR001471 GO:0003700|GO:0006355
Vian7g00495 242 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Vian7g00495 242 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 191 - -
Vian7g00495 242 MobiDBLite consensus disorder prediction 7 28 - -
Vian7g00495 242 MobiDBLite consensus disorder prediction 143 162 - -
Vian7g00495 242 MobiDBLite consensus disorder prediction 1 28 - -
Vian7g00495 242 SUPERFAMILY DNA-binding domain 37 95 IPR016177 GO:0003677
Vian7g00495 242 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Vian7g00495 242 Gene3D AP2/ERF domain 36 95 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00495 Vian-Chr7 12251830 12252558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00495 29 151 AP2-EREBP Transcription Factor Family AT1G19210 57.724 1.14e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Vian7g00495 AP2 1e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00495 - - vum:124843463 467.233