Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00492 ATGGTATTGTTGGAAAGAAGACCCTGTAAATTTGATGAGAGAAAAACAAAAACAAAAAACTCACATATCGAAAGTGAAAGAGATCAAACGATTTTTGAATGTGATTATGTAAAAATAGTGAAGCTAGATCGAATACCTTTATCAATGCAACTTGGTGACTGGTGTGGTCCTACTAAATTTGTAGTTATCATATCCGACGATCTTTCCATTGTTTTCATTCGTCTTCAACTTCTGATTTATCGGGCGTACATTGGGCGCGTGAAGGAGAGGTACGGTGGGCGTTGGATTTGTGGGCTGTGTTCGGAGGCAGTGAAAGAAGAGAGGGAGAGAGAGAAAATCATGATTACAACAGACGAAGCTCTGAAACGTCACATGAGGTTCTGCCAACAGTTCAGATCATCAACTCCTCCCGACAGCACGAATGAGGATTTCATCCTCGCCGTCAAACAGATTCTGTTCCGAACTTTGGATTCTCCGAGGAAAGACCGTTTCATTTGTCGACCACTTGGAAGATCTCAAAGCTGCTTCTCAACCATGCAAGGAACGCAGCAGGCAGAGAGGGAATGA 567 0.4286 MVLLERRPCKFDERKTKTKNSHIESERDQTIFECDYVKIVKLDRIPLSMQLGDWCGPTKFVVIISDDLSIVFIRLQLLIYRAYIGRVKERYGGRWICGLCSEAVKEEREREKIMITTDEALKRHMRFCQQFRSSTPPDSTNEDFILAVKQILFRTLDSPRKDRFICRPLGRSQSCFSTMQGTQQAERE 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00492 188 PANTHER OS01G0745000 PROTEIN 81 183 IPR012876 -
Vian7g00492 188 Pfam Protein of unknown function (DUF1677) 81 154 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00492 Vian-Chr7 12181483 12218575 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00492 - - vum:124842347 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00492 7 12181483 12218575 Vian7g00492 7 12181483 12218575 ECH
Vian4g02078 4 37651895 37652338 Vian7g00492 7 12181483 12218575 ECH
Vian1g00491 1 4645814 4646251 Vian7g00492 7 12181483 12218575 ECH
Vian9g00377 9 3605605 3606087 Vian7g00492 7 12181483 12218575 ECH