Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00489 ATGAGTACTAAAAGGAACACATGGAAGTCTGTGATCTTGATCTTAGGTTGTTACAAGGTTAAGTGTCCCCTGGAGGAATCAGAAAAACAGGTTTTGAAACAAGGGTCTTTCCAGAGGCTGTGTTTATCTGATGTGAGCAATTCAAGCTCCACTCAGGCCATTGAAGATCTTTCAATTTCCTTTGCTGGGTCCAAACTTTATGCATTCACACTTGAGGAGCTAAGGGAAGCAACAAACAGTTTCTCATGGAGTAATATGCTAGGAGAAGGAGGGTTTGGACCTGTGTACAAGGGTTTTGTGGATGACAAACTTAGGCCTGGTTTGAAGGCTCAGACTGTTGCTGTGAAAAGGTTGGACTTGGATGGCTTGCAGGGTCACAGGGAGTGGCTGGCAGAGATTATATTTCTTGGACAGCTAAGGCATCCACATCTTGTCAAGTTAATTGGGTACTGTTATGAGGATGAACACAGACTGTTGATGTATGAATACATGCCAAGAGGCAGCTTGGAGAATCAACTCTTCAGAAAATACTCTGCTGCTATGCCATGGTCAACCAGGATGAAAATTGCATTAGGAGCTGCCAAAGGTCTGGTCTTCCTTCATGAATCAGATAAGCCTGTAATATACCGCGATTTCAAAGCTTCAAACATTTTACTAGACTCGCTTATTTTGGTCCAAGAACACCTGGGTTTGTCTCACCTTAGGCAGCAGGCTATCGTTTTCAACCTCATGTCTGATGCAGCTTTTGTGAATCATATCATGTATATCATAGGTATCAGACAGAAGATAGCAGAAGAGTTTGGATCAAGTCCTAACAAGGATGAAATACTTGGGAAACACATGCCAAAGATGTCATTGTGA 861 0.4251 MSTKRNTWKSVILILGCYKVKCPLEESEKQVLKQGSFQRLCLSDVSNSSSTQAIEDLSISFAGSKLYAFTLEELREATNSFSWSNMLGEGGFGPVYKGFVDDKLRPGLKAQTVAVKRLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEDEHRLLMYEYMPRGSLENQLFRKYSAAMPWSTRMKIALGAAKGLVFLHESDKPVIYRDFKASNILLDSLILVQEHLGLSHLRQQAIVFNLMSDAAFVNHIMYIIGIRQKIAEEFGSSPNKDEILGKHMPKMSL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00489 286 ProSiteProfiles Protein kinase domain profile. 81 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00489 286 Pfam Protein tyrosine and serine/threonine kinase 83 222 IPR001245 GO:0004672|GO:0006468
Vian7g00489 286 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Vian7g00489 286 Gene3D Transferase(Phosphotransferase) domain 1 164 246 - -
Vian7g00489 286 FunFam Serine/threonine-protein kinase BIK1 47 163 - -
Vian7g00489 286 SUPERFAMILY Protein kinase-like (PK-like) 58 221 IPR011009 -
Vian7g00489 286 Gene3D Phosphorylase Kinase; domain 1 42 163 - -
Vian7g00489 286 PANTHER OS01G0588500 PROTEIN-RELATED 48 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00489 Vian-Chr7 12147920 12158714 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00489 68 220 Glycoside Hydrolase AT3G07070 51.282 4.46e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vian7g00489 PK_Tyr_Ser-Thr 1.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00489 - - gmx:100802636 433.721