Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00482 ATGTCAGGCAATCATCAATTCATTCTCTTCATCTTCTTCACCACCTTCTTCTTCTCTCCCATTCATTCCCTCTTCTTCAACATAACAAACTTTGATGATCCAACAACCTCGTCCGACATATCCTACCAGGGTGATGGAAGATCAACCAACGGCTCCATCGACCTCAACAAAGTTAGCTACTATTTTCGTGTCGGAAGGGCTCTTTACTCCAAACCCCTCCACCTCTGGGACCCATCTTCCAATGTAGTCACCGACTTTGTCACACGCTTCACCTTCTCCATTGACAGAGTAAATAACTCTGAGACCTCTTATGCAGATGGCTTTGCGTTTTACCTTGCTCCTCTTGGCTACCAGATCCCACCAAATTCCGCAGGTGGCACCTTTGCCCTCTTCAACGCCACCACCAACAGCGAACTCCCTGAAAACCATGTTTTTGCTGTGGAGTTTGACACCTTCATTGGCTCCACTGATCCCCCAACGAAACATGTCGGTGTAGACGACAACTCTTTAACCTCTGTGGCGTTTGCGAACTTTGACATCGACAAGAACCTCGGAAAAATGTGTCATACTTTGATCACCTACACCGCCTCCACTCAAACCCTCTTTGTTGCTTGGTCCTTCAAAGGAATACCAACCACAAAGGACAACGACAACAACTCCTCCCTGTCTTACCAGATCGACCTCAAGAAAATTCTTCCAGAGTGGGTCAATATTGGTTTCTCTGCCTCAACTGGACTTTACACTGAACACAATGTTATTTATTCGTGGGAGTTCAACTCCACTTTGAAAGATTCCTCCGTGGATGATGAGGGTGTGAAACTAAAACACAAAGGGTCAAAGCTTGTGTTAATAGTTGCGGTTCTCTGTCCTCTGGTTCTTCTGTTAGTGGCGGCGAGTGTTTTTGTCTTCGTGTTGATAAGGAAAAAGAGAAGAATGGATGATTGTATGTTATATGATGTTGGAGACGACGAAGAGGGTCCAACTTCAGTTAAATTTGATCTGGATAGAGGAGCTATCCCGAGAAAATTCGAGTACAAAGAGCTAGTGGATGCCACTAACGGCTTTTCAGACGAAAGAAGGCTGGGACAAGGAGCTTCGGGGCAGGTATACAAGGGTGTGTTGAGTTACCTGGGAAGAGTTGTGGCCGTGAAGAGAATATTTGCAGACTTCGAGAATTCAGAGAGAGTTTTTACCAACGAGGTCAGGATAATAAGCCGTTTAATCCACAAAAACTTGGTCCAGTTCATAGGGTGGTGTCACGAGGAAGGTGAATTTCTGTTGGTTTTCGAGTACATGCAAAATGGAAGCCTGGACTCTCATTTGTTTGGAAACAAGAAGATCTTGGAGTGGCGTGCGAGGTACAAGATTGCTTTAGGTGTGGTAACCGCGCTTCAATATCTTCACGAGGACGCAGAGCAATGTGTGCTACACAGGGACATAAAATCAGCGAATGTGTTGTTGGACATGGAATTCAACACAAAGGTGGGGGATTTTGGCATGGCGAAATTGGTGGATCCAAGGCTGAGAACTCAACGAACTGGGGTGGTCGGAACTTACGGTTACTTAGCACCTGAATATGTGAACGGAGGAAGAGCTAGCAGGGAGTCAGATATATACAGTTTTGGAGTGGTGGCATTGGAGATAGCAAGTGGGAGGAGGACATACCAAGATGGTGAGTTTCATGTTTGTTTGATGAATTGGGTGTGGCAGCTTTATGTGGAAGGAGAAGTTATGAGGGCTGCAGATGAGAAATTGAAAGAGGAGTTTGATGAGAACGAGATGAGGAGTTTGCTTGTGGTGGGGTTGTGGTGCACAAATCCTAATGATAAAGAGAGGCCTAAGGCTGCAGAAATCATCAAGGTTTTGCAGCTTCAATCACCATTGCCGCTGCTTCCACTTGATATGTATGAACGTGCTCCTCCCATGCAAGCCATTAGGATGCCCCATCATCATTCAGGCCAATCTTCACCCATTAGTAACAGTCTTGTTAGTGTTGGAAGATAG 2004 0.4561 MSGNHQFILFIFFTTFFFSPIHSLFFNITNFDDPTTSSDISYQGDGRSTNGSIDLNKVSYYFRVGRALYSKPLHLWDPSSNVVTDFVTRFTFSIDRVNNSETSYADGFAFYLAPLGYQIPPNSAGGTFALFNATTNSELPENHVFAVEFDTFIGSTDPPTKHVGVDDNSLTSVAFANFDIDKNLGKMCHTLITYTASTQTLFVAWSFKGIPTTKDNDNNSSLSYQIDLKKILPEWVNIGFSASTGLYTEHNVIYSWEFNSTLKDSSVDDEGVKLKHKGSKLVLIVAVLCPLVLLLVAASVFVFVLIRKKRRMDDCMLYDVGDDEEGPTSVKFDLDRGAIPRKFEYKELVDATNGFSDERRLGQGASGQVYKGVLSYLGRVVAVKRIFADFENSERVFTNEVRIISRLIHKNLVQFIGWCHEEGEFLLVFEYMQNGSLDSHLFGNKKILEWRARYKIALGVVTALQYLHEDAEQCVLHRDIKSANVLLDMEFNTKVGDFGMAKLVDPRLRTQRTGVVGTYGYLAPEYVNGGRASRESDIYSFGVVALEIASGRRTYQDGEFHVCLMNWVWQLYVEGEVMRAADEKLKEEFDENEMRSLLVVGLWCTNPNDKERPKAAEIIKVLQLQSPLPLLPLDMYERAPPMQAIRMPHHHSGQSSPISNSLVSVGR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00482 667 ProSiteProfiles Protein kinase domain profile. 355 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00482 667 Gene3D Transferase(Phosphotransferase) domain 1 432 627 - -
Vian7g00482 667 Pfam Protein kinase domain 356 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00482 667 MobiDBLite consensus disorder prediction 649 667 - -
Vian7g00482 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 262 IPR013320 -
Vian7g00482 667 PANTHER - 49 625 - -
Vian7g00482 667 Gene3D Phosphorylase Kinase; domain 1 340 431 - -
Vian7g00482 667 Pfam Legume lectin domain 25 265 IPR001220 GO:0030246
Vian7g00482 667 SMART serkin_6 355 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00482 667 MobiDBLite consensus disorder prediction 647 667 - -
Vian7g00482 667 ProSitePatterns Protein kinases ATP-binding region signature. 361 384 IPR017441 GO:0005524
Vian7g00482 667 CDD lectin_legume_LecRK_Arcelin_ConA 26 262 IPR001220 GO:0030246
Vian7g00482 667 FunFam L-type lectin-domain containing receptor kinase IX.1 22 276 - -
Vian7g00482 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Vian7g00482 667 FunFam L-type lectin-domain containing receptor kinase IX.1 340 431 - -
Vian7g00482 667 SUPERFAMILY Protein kinase-like (PK-like) 340 644 IPR011009 -
Vian7g00482 667 ProSitePatterns Legume lectins alpha-chain signature. 232 241 IPR000985 -
Vian7g00482 667 FunFam L-type lectin-domain containing receptor kinase IX.1 432 632 - -
Vian7g00482 667 Gene3D - 22 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00482 Vian-Chr7 12068081 12070084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00482 5 635 Receptor kinase-like Gene Family AT5G10530 44.601 1.45e-180 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vian7g00482 Pkinase 1.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00482 - - vun:114193012 1217.99