Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00479 ATGGCTGCCACTGAAACCTTTGGAGAGATCATAGATGGTGATGTCTTCAAGTACTATGCACATGGCTGCTGGAACAAGTCCTCTTCTGGGAAATCCGTTCCCATCATCAATCCCTCCACTAGGAAGCCCCACTTCAAGGTCCAAGCTTGTACCCGGGAAGAGGTTGATAGCGTCATGGAATCAGCAAAAACAGCTCAAAAATCATGGGCCAAGACTCCACTGTGGAAAAGAGCAGAGTTGCTTCACAAGGCTGCAGCAATACTGAAGGAACACAAAGCATCTATTGCTGAGTGTCTGGTTAAGGAGATTGCAAAGCCAGCTAAAGATGCTGTCACTGAAGTGGTCAGATCAGGAGATTTGATCTCATATTGTGCTGAGGAAGGTGTAAGAATTCTTGGGGAAGGAAAGTTTCTGGTCTCTGATAGTTTTCCAGGCAATGATAGAACCAAATACTGTCTCTCTTCCAAGATTCCACTTGGAGTTGTTTTAGCCATTCCACCTTTTAACTATCCTGTTAATCTGGCTGTTTCAAAGATTGCTCCAGCTCTTATTTCTGGAAACTCCATTGTTCTTAAACCCCCCACTCAGGGTGCCGTGGCTGCATTACACATGGTGCATTGCTTTCATTTGGCTGGTTTTCCCCAAGGTCTTATTAGCTGTGTCACAGGAAAAGGTTCTGAGATTGGTGATTTTCTTACAATGCATCCGGGGGTGAACTGCATAAGTTTTACTGGTGGAGACACCGGAATAGCAATATCAAAGAAGGCTGGCATGGTTCCTCTTCAAATGGAGCTGGGAGGAAAAGATGCATGCATTGTTCTTGAAGATGCTGACTTGGATTTGGCAGCTGCTAACATGGTGAAAGGAGCTTTCTCTTACAGTGGTCAAAGATGCACTGCTGTAAAGGTTGTTTTGGTCATGGAATCGGTTGCCAACACCCTTGTTAAGAAAATCAACGATAAAGTTGCCAAGTTAACTGTTGGACCACCTGAGAATGACTGTGATGTAACACCAGTTGTCACAGAATCCTCTGCTAACTTCATTGAAGGATTGGTAATGGATGCTAAGGAGAAAGGAGCAACATTCTGCCAGGAATACAGAAGGGAAGGAAATCTCATTTGGCCATTGCTGTTGGATAATGTTCGTCCTGATATGAGGATAGCATGGGAGGAGCCATTTGGACCAGTTTTGCCAGTTATCAGAATAAATTCTGTTGAGGAGGGAATCCACCACTGTAATGCCAGCAATTTTGGCCTTCAGGGATGTGTCTTCACCAAAGACATTAACAAAGCAATGTTGATAAGTGATGCAATGGAGACAGGAACAGTTCAAATTAACTCAGCACCATCTCGTGGACCTGATCACTTTCCTTTTCAGGAACCCTTCTTCCCTGTTTGGATCCACGTCGACGTCGCCGAGAGGGTTCTTCTTGCATCCAACCCTTCCTTCCTCTTCTTTGTTCCGATTCGTCTAGGGTTCTTCGTGCATCCAACCAAGCCTAGGGTCGTCGATGGCCTCAGCAACCTCATTCCGCCGCTGGGCTTGGCGCTTCGTGTCAACTTCTTGAAATTGAAGGAGGGCGCAGTTGGAGACAAGGTTTTGGATCCGTTTGTTGCCACCCCTCAACTCTCACTTTCAGATCCGTTTCTTTCCATCTCCCAACTCTCACTTTCTCTTCTTTTCATATTCGAATTGGCGAGTGAAGAGAAAGACAACTTAGTTCGTTCCATCCACCTGAAAGCTGATAGAACCTCCGAGTCTGACTCAGAAGCGATGGTCACCTTCATCCTGCAGAAACTCAAGCCCGACACCATCGCATGGATCATGGACTCTCTCACACCCGAGTCCCTCTCCACCTTCTTTAATCTCGTTTTCATTGGAAAAGAAATTTGA 1893 0.4569 MAATETFGEIIDGDVFKYYAHGCWNKSSSGKSVPIINPSTRKPHFKVQACTREEVDSVMESAKTAQKSWAKTPLWKRAELLHKAAAILKEHKASIAECLVKEIAKPAKDAVTEVVRSGDLISYCAEEGVRILGEGKFLVSDSFPGNDRTKYCLSSKIPLGVVLAIPPFNYPVNLAVSKIAPALISGNSIVLKPPTQGAVAALHMVHCFHLAGFPQGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAGMVPLQMELGGKDACIVLEDADLDLAAANMVKGAFSYSGQRCTAVKVVLVMESVANTLVKKINDKVAKLTVGPPENDCDVTPVVTESSANFIEGLVMDAKEKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPSRGPDHFPFQEPFFPVWIHVDVAERVLLASNPSFLFFVPIRLGFFVHPTKPRVVDGLSNLIPPLGLALRVNFLKLKEGAVGDKVLDPFVATPQLSLSDPFLSISQLSLSLLFIFELASEEKDNLVRSIHLKADRTSESDSEAMVTFILQKLKPDTIAWIMDSLTPESLSTFFNLVFIGKEI 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00479 630 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 33 265 IPR016162 GO:0016491
Vian7g00479 630 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 263 270 IPR029510 GO:0016491
Vian7g00479 630 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 268 457 IPR016163 GO:0016620
Vian7g00479 630 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 267 457 - -
Vian7g00479 630 PANTHER ALDEHYDE DEHYDROGENASE 3 459 - -
Vian7g00479 630 SUPERFAMILY ALDH-like 16 458 IPR016161 GO:0016491
Vian7g00479 630 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 22 287 - -
Vian7g00479 630 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 291 302 IPR016160 GO:0016491
Vian7g00479 630 Pfam Aldehyde dehydrogenase family 24 458 IPR015590 GO:0016491
Vian7g00479 630 CDD ALDH_F11_NP-GAPDH 15 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00479 Vian-Chr7 12008301 12026468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00479 1 459 Aldehyde Dehydrogenase Gene Family AT2G24270 86.275 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00479 K00131 - gmx:100789108 860.907