Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00476 ATGGATCTTGCTCTGAACTACTTTGTTTTATTTTATTTTTGCAATATCCTAAGGCAATTGCAGCAGGAGACAGCCTCTATGCGTGGAAGTCAAATGTTGATGCAGGTGTCCTCTGATCAGGCACAGCTGTTTGCAATGCTTGTGCAGATTCTTGGAGAAGAACGGTGTATTGAAGTTGGCGTTTATACATGGGTTCTCCTCAGGTTACTTTTAAATGAACAAGCCCTCATTGAAAAAGTGGAGAATCATGATGTGCCCTTGTATGATGCTATAAAGTTTTCCTCACCTAGTCCTGAGAAGGCTGCTAGTGCTTCTGAGAATGAGAACAATTTTATTCAAATACTTCTCACTAGGTTACTGGTTAGACCTGATGCTGCACCCCTTTTTGCAGAATTGATTCATCTCTTTGGTAGGCCGACTACTGATTCATTGACTATAGAAGGGGATAACAAGAAGTTTGACAACACCTCTCTTGAAGGAGAAGTTGTTGAAGAGGGAACATATTTGAAAAGGTGCCAGCAGCAAGTGATTGAGAGGGCTCTTACCGAGTTGCTTCTTCCTTCCATAGATCAAAGCTCTGATGAAGCTCGCAATTCTTTTGCAACTGACTTGGTAAAACAATTGAGTTATATTGAGACACACATAATTGCTATTACAGGTGGAAGTAAACCATTGGGAAGTGCTCCTGCTGGAGTTGAAGGTCAGCCAAATAAAGTAAATAACCGCAAAAATTTGAGAACTGGAAGTGCTGCATTATCTAGACGACCAATAGTGGCAACAAATTCTTCTCCACCATCTCCTGCAGCCCTACGAGCTTCTATGTCATTACAATTGCAGTTGCTCCTGAGATTTCTTCCTACTCTTTGCACTGACAGGAAACAATGGAGAAAATTGCAGCAATTTTCAGTAACTGGAAAATTGTGGCCAAAGTTGTATGAAATCAAGGTTAGTCCTATAACGACACCCATTGATGAAGGAACCATTGAGGAACTTTGCTTGCCAGATATCCACCACAAGGAGCTCAAACTCAATAGACAATATTTGCTAAGCCAAATTAAAAGGAAGACCTTAAGTTGA 1077 0.4076 MDLALNYFVLFYFCNILRQLQQETASMRGSQMLMQVSSDQAQLFAMLVQILGEERCIEVGVYTWVLLRLLLNEQALIEKVENHDVPLYDAIKFSSPSPEKAASASENENNFIQILLTRLLVRPDAAPLFAELIHLFGRPTTDSLTIEGDNKKFDNTSLEGEVVEEGTYLKRCQQQVIERALTELLLPSIDQSSDEARNSFATDLVKQLSYIETHIIAITGGSKPLGSAPAGVEGQPNKVNNRKNLRTGSAALSRRPIVATNSSPPSPAALRASMSLQLQLLLRFLPTLCTDRKQWRKLQQFSVTGKLWPKLYEIKVSPITTPIDEGTIEELCLPDIHHKELKLNRQYLLSQIKRKTLS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00476 358 Gene3D Vaccinia Virus protein VP39 14 141 IPR029063 -
Vian7g00476 358 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 152 300 - -
Vian7g00476 358 Pfam O-methyltransferase 15 63 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00476 Vian-Chr7 11958965 11961244 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00476 16 63 Monolignol Biosynthesis Gene Families AT3G62000 77.083 4.17e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00476 - - gmx:100781696 301.597